get_fastq_paths: Retrieve the paths of the filtered and trimmed Fastq files
In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes
View source: R/make_asv_abund_matrix.R
get_fastq_paths R Documentation
Retrieve the paths of the filtered and trimmed Fastq files
Description
Retrieve the paths of the filtered and trimmed Fastq files
Usage
get_fastq_paths(data_tables, my_direction, my_primer_pair_id)
Arguments
data_tables
The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences
my_direction
Whether primer is in forward or reverse direction
my_primer_pair_id
The specific metabarcode ID
demulticoder documentation built on June 8, 2025, 12:47 p.m.
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View source: R/make_asv_abund_matrix.R
| get_fastq_paths | R Documentation |
Retrieve the paths of the filtered and trimmed Fastq files
Description
Retrieve the paths of the filtered and trimmed Fastq files
Usage
get_fastq_paths(data_tables, my_direction, my_primer_pair_id)
Arguments
data_tables |
The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences |
my_direction |
Whether primer is in forward or reverse direction |
my_primer_pair_id |
The specific metabarcode ID |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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