run_cutadapt: Core function for running 'Cutadapt'
In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes
View source: R/cut_primers_trim_reads.R
run_cutadapt R Documentation
Core function for running 'Cutadapt'
Description
Core function for running 'Cutadapt'
Usage
run_cutadapt(
cutadapt_path,
cutadapt_data_barcode,
barcode_params,
minCutadaptlength
)
Arguments
cutadapt_path
A path to the 'Cutadapt' program.
minCutadaptlength
Read lengths that are lower than this threshold will
be discarded. Default is 0.
Value
Trimmed read.
demulticoder documentation built on June 8, 2025, 12:47 p.m.
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View source: R/cut_primers_trim_reads.R
| run_cutadapt | R Documentation |
Core function for running 'Cutadapt'
Description
Core function for running 'Cutadapt'
Usage
run_cutadapt(
cutadapt_path,
cutadapt_data_barcode,
barcode_params,
minCutadaptlength
)
Arguments
cutadapt_path |
A path to the 'Cutadapt' program. |
minCutadaptlength |
Read lengths that are lower than this threshold will be discarded. Default is 0. |
Value
Trimmed read.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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