plot_post_trim_qc: Wrapper script for plotQualityProfile after trim steps and...
In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes
View source: R/cut_primers_trim_reads.R
plot_post_trim_qc R Documentation
Wrapper script for plotQualityProfile after trim steps and primer removal.
Description
Wrapper script for plotQualityProfile after trim steps and primer removal.
Usage
plot_post_trim_qc(
cutadapt_data,
output_directory_path,
n = 5e+05,
barcode_params
)
Arguments
cutadapt_data
FASTQ read files trimmed of primers
output_directory_path
The path to the directory where resulting files
are output
n
(Optional). Default 500,000.
The number of records to sample from the fastq file.
Value
Quality profiles of reads after primer trimming
demulticoder documentation built on June 8, 2025, 12:47 p.m.
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View source: R/cut_primers_trim_reads.R
| plot_post_trim_qc | R Documentation |
Wrapper script for plotQualityProfile after trim steps and primer removal.
Description
Wrapper script for plotQualityProfile after trim steps and primer removal.
Usage
plot_post_trim_qc(
cutadapt_data,
output_directory_path,
n = 5e+05,
barcode_params
)
Arguments
cutadapt_data |
FASTQ read files trimmed of primers |
output_directory_path |
The path to the directory where resulting files are output |
n |
(Optional). Default 500,000. The number of records to sample from the fastq file. |
Value
Quality profiles of reads after primer trimming
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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