plot_qc: Wrapper function for plotQualityProfile function
In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes
View source: R/cut_primers_trim_reads.R
plot_qc R Documentation
Wrapper function for plotQualityProfile function
Description
Wrapper function for plotQualityProfile function
Usage
plot_qc(cutadapt_data, output_directory_path, n = 5e+05, barcode_params)
Arguments
cutadapt_data
FASTQ read files trimmed of primers
output_directory_path
The path to the directory where resulting files
are output
n
(Optional). Default 500,000.
The number of records to sample from the fastq file.
Value
'DADA2' wrapper function for making quality profiles for each sample
demulticoder documentation built on June 8, 2025, 12:47 p.m.
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View source: R/cut_primers_trim_reads.R
| plot_qc | R Documentation |
Wrapper function for plotQualityProfile function
Description
Wrapper function for plotQualityProfile function
Usage
plot_qc(cutadapt_data, output_directory_path, n = 5e+05, barcode_params)
Arguments
cutadapt_data |
FASTQ read files trimmed of primers |
output_directory_path |
The path to the directory where resulting files are output |
n |
(Optional). Default 500,000. The number of records to sample from the fastq file. |
Value
'DADA2' wrapper function for making quality profiles for each sample
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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