infer_asvs: Core 'DADA2' function to learn errors and infer ASVs

In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes

Core 'DADA2' function to learn errors and infer ASVs

Description

Core 'DADA2' function to learn errors and infer ASVs

Usage

infer_asvs(
  data_tables,
  my_direction,
  my_primer_pair_id,
  barcode_params,
  output_directory_path
)

Arguments

data_tables	The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences
my_direction	Whether primer is in forward or reverse direction
my_primer_pair_id	The specific metabarcode ID
output_directory_path	The path to the directory where resulting files are output

Value

asv_data

demulticoder documentation built on June 8, 2025, 12:47 p.m.