API for a3609640/eIF4F.analysis
A R package to analyze eIF4F subunits in human cancers
| Global functions | |
|---|---|
| %>% | Man page |
| .CNV_all_cancer | Man page Source code |
| .CNV_barplot | Man page Source code |
| .CNV_ind_cancer | Man page Source code |
| .CNV_sum_barplot | Man page Source code |
| .CNVratio_boxplot | Man page Source code |
| .CNVratio_tumor | Man page Source code |
| .CORs_coeff_heatmap | Man page Source code |
| .CORs_summary_bargraph | Man page Source code |
| .CORs_vennplot | Man page Source code |
| .EIF_correlation | Man page Source code |
| .KM_curve | Man page Source code |
| .RNApro_scatterplot | Man page |
| .RNAratio_boxplot | Man page Source code |
| .RNAratio_calculation | Man page Source code |
| .RNAratio_selection | Man page Source code |
| .RNAratio_tumortype | Man page Source code |
| .RNAseq_PCA | Man page Source code |
| .RNAseq_all_gene | Man page Source code |
| .RNAseq_boxplot | Man page Source code |
| .RNAseq_grouped_boxplot | Man page Source code |
| .RNAseq_ind_gene | Man page Source code |
| .RNAseq_tumortype | Man page Source code |
| .biplot | Man page Source code |
| .biplot_title | Man page Source code |
| .combine_CORs_list | Man page Source code |
| .combine_CORs_summary | Man page Source code |
| .correlation_coefficient | Man page Source code |
| .forest_graph | Man page Source code |
| .get_CCLE_Proteomics_subset | Man page |
| .get_CCLE_RNAseq_subset | Man page |
| .get_CPTAC_LUAD_Phosproteomics_subset | Man page |
| .get_CPTAC_LUAD_Proteomics_subset | Man page |
| .get_TCGA_CNV | Man page Source code |
| .get_TCGA_CNV_ratio | Man page Source code |
| .get_TCGA_CNV_value | Man page Source code |
| .get_TCGA_GTEX_RNAseq | Man page Source code |
| .get_TCGA_RNAseq | Man page Source code |
| .get_cluster_genes | Man page Source code |
| .get_df_subset | Man page Source code |
| .is_significant_correlation | Man page Source code |
| .is_significant_negcor | Man page Source code |
| .is_significant_poscor | Man page Source code |
| .matrix_plot | Man page Source code |
| .multivariable_analysis | Man page Source code |
| .pathway_dotplot | Man page Source code |
| .plot_Corr_RNAseq_TCGA_GTEX | Man page Source code |
| .plot_CoxPH_RNAseq_TCGA | Man page Source code |
| .plot_KM_RNAseq_TCGA | Man page Source code |
| .plot_PCA_CPTAC_LUAD | Man page Source code |
| .plot_PCA_TCGA_GTEX | Man page Source code |
| .plot_PCA_TCGA_GTEX_tumor | Man page Source code |
| .plot_bargraph_CNV_TCGA | Man page Source code |
| .plot_boxgraph_CNVratio_TCGA | Man page Source code |
| .plot_boxgraph_RNAratio_TCGA | Man page Source code |
| .plot_boxgraph_RNAseq_TCGA | Man page Source code |
| .plot_boxgraph_protein_CPTAC | Man page |
| .plot_matrix_CNVcorr_TCGA | Man page Source code |
| .plot_scatter_RNApro_CCLE | Man page |
| .plot_scatter_RNApro_LUAD | Man page |
| .plot_scatterplot_protein_CPTAC | Man page |
| .protein_boxplot | Man page |
| .protein_imputePCA | Man page Source code |
| .protein_scatterplot | Man page |
| .selected_biplot | Man page Source code |
| .summarize_counts | Man page Source code |
| .univariable_analysis | Man page Source code |
| .violinplot | Man page Source code |
| EIF4F_CNV_analysis | Man page Source code |
| EIF4F_Corrgene_analysis | Man page Source code |
| EIF4F_DEG_analysis | Man page Source code |
| EIF4F_PCA | Man page Source code |
| EIF4F_Proteomics_analysis | Man page |
| EIF4F_RNA_pro_correlation | Man page |
| EIF4F_Survival_analysis | Man page Source code |
| color | Man page Source code |
| eIF4F.analysis | Man page |
| eIF4F.analysis-package | Man page |
| initialize_RNAseq_data | Man page Source code |
| initialize_cnv_data | Man page Source code |
| initialize_data | Man page Source code |
| initialize_dir | Man page Source code |
| initialize_format | Man page Source code |
| initialize_phosphoproteomics_data | Man page Source code |
| initialize_proteomics_data | Man page Source code |
| initialize_survival_data | Man page Source code |
