califano-lab/PISCES: Protein Activity Inferecne in Single Cells
PISCES is the Califano lab pipeline for single-cell RNAseq analysis. It leverages the ARACNe-3 and NaRnEA algorithms to infer regulatory networks and protein activity, with clustering, plotting, and master regulator identification functionality. PISCES can work off of either a Seurat object or in a more independent manner.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | What license it uses |
| Version | 0.0.0.9000 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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