network_match_narnea: Performs NaRnEA on multiple samples using network matching....

In califano-lab/PISCES: Protein Activity Inferecne in Single Cells

Performs NaRnEA on multiple samples using network matching. Those samples with matched networks will have protein activity generated with one network. Those without will be analyzed using MetaNaRnEA.

Description

Performs NaRnEA on multiple samples using network matching. Those samples with matched networks will have protein activity generated with one network. Those without will be analyzed using MetaNaRnEA.

Usage

network_match_narnea(ges.mat, net.list, net.match.vec)

Arguments

ges.mat	GES matrix (genes X samples).
net.list	List of networks appropriately parametrized for NaRnEA.
net.match.vec	Named vector of the same length as the number of samples, with either the name of a matched network or NA

Value

NaRnEA object

califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.