cluster_mr_volcano: Generates cluster-specific volcano plots from the given...
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
View source: R/plotting_funcs.R
cluster_mr_volcano R Documentation
Generates cluster-specific volcano plots from the given master regulator object.
Description
Generates cluster-specific volcano plots from the given master regulator object.
Usage
cluster_mr_volcano(mr.obj, num.mrs = 10)
Arguments
mr.obj
Master regulator object, such as that generated by 'cluster_signature_mrs'.
Should be a list with a 'cluster.narnea' element, containing cluster-specific NaRnEA results (NES and PES matrices).
num.mrs
Number of top / bottom MRs to label. Default of 10.
Value
A ggplot object.
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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View source: R/plotting_funcs.R
| cluster_mr_volcano | R Documentation |
Generates cluster-specific volcano plots from the given master regulator object.
Description
Generates cluster-specific volcano plots from the given master regulator object.
Usage
cluster_mr_volcano(mr.obj, num.mrs = 10)
Arguments
mr.obj |
Master regulator object, such as that generated by 'cluster_signature_mrs'. Should be a list with a 'cluster.narnea' element, containing cluster-specific NaRnEA results (NES and PES matrices). |
num.mrs |
Number of top / bottom MRs to label. Default of 10. |
Value
A ggplot object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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