AddUMAP: Generates a UMAP for the active assay of the given object.
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
AddUMAP R Documentation
Generates a UMAP for the active assay of the given object.
Description
Generates a UMAP for the active assay of the given object.
Usage
AddUMAP(pisces.obj, dense.map = FALSE)
Arguments
pisces.obj
A Seurat object with 'scale.data' in the active assay.
dense.map
Flag to return dense-UMAP. Default of FALSE.
Value
A Seurat object with a 'umap' object added to the 'misc' field of the active assay.
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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| AddUMAP | R Documentation |
Generates a UMAP for the active assay of the given object.
Description
Generates a UMAP for the active assay of the given object.
Usage
AddUMAP(pisces.obj, dense.map = FALSE)
Arguments
pisces.obj |
A Seurat object with 'scale.data' in the active assay. |
dense.map |
Flag to return dense-UMAP. Default of FALSE. |
Value
A Seurat object with a 'umap' object added to the 'misc' field of the active assay.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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