cpm_norm: Peforms a CPM normalization on the given matrix.
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
View source: R/gexp-transform_funcs.R
cpm_norm R Documentation
Peforms a CPM normalization on the given matrix.
Description
Peforms a CPM normalization on the given matrix.
Usage
cpm_norm(dat.mat, l2 = FALSE, remove.zeroes = TRUE)
Arguments
dat.mat
Matrix of data, typically unnormalized counts (genes X samples).
l2
If true, will log transform the matrix. Default of FALSE.
remove.zeroes
Removes rows (genes) with zero expression across all samples. Default of TRUE.
Value
CPM normalizaed matrix.
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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View source: R/gexp-transform_funcs.R
| cpm_norm | R Documentation |
Peforms a CPM normalization on the given matrix.
Description
Peforms a CPM normalization on the given matrix.
Usage
cpm_norm(dat.mat, l2 = FALSE, remove.zeroes = TRUE)
Arguments
dat.mat |
Matrix of data, typically unnormalized counts (genes X samples). |
l2 |
If true, will log transform the matrix. Default of FALSE. |
remove.zeroes |
Removes rows (genes) with zero expression across all samples. Default of TRUE. |
Value
CPM normalizaed matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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