louvain_clust: Runs Louvain clusering on the given object with the specified...
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
View source: R/cluster_funcs.R
louvain_clust R Documentation
Runs Louvain clusering on the given object with the specified KNN graph.
Description
Runs Louvain clusering on the given object with the specified KNN graph.
Usage
louvain_clust(dist.mat, num.neighbors = 5)
Arguments
num.neighbors
Number of neighbors to use in the KNN graph. Default of 5.
data.obj
Seurat object w/ dist.mat object in misc of active assay.
Value
Vector of cluster assignments.
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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View source: R/cluster_funcs.R
| louvain_clust | R Documentation |
Runs Louvain clusering on the given object with the specified KNN graph.
Description
Runs Louvain clusering on the given object with the specified KNN graph.
Usage
louvain_clust(dist.mat, num.neighbors = 5)
Arguments
num.neighbors |
Number of neighbors to use in the KNN graph. Default of 5. |
data.obj |
Seurat object w/ dist.mat object in misc of active assay. |
Value
Vector of cluster assignments.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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