make_umap: Generates a UMAP using the uwot package.
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
View source: R/reduction_funcs.R
make_umap R Documentation
Generates a UMAP using the uwot package.
Description
Generates a UMAP using the uwot package.
Usage
make_umap(dat.mat, dense = TRUE)
Arguments
dat.mat
Matrix of data (features X samples).
dense.map
Flag to use dense UMAP. Default of TRUE.
Value
Two column matrix with UMAP representation of samples.
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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View source: R/reduction_funcs.R
| make_umap | R Documentation |
Generates a UMAP using the uwot package.
Description
Generates a UMAP using the uwot package.
Usage
make_umap(dat.mat, dense = TRUE)
Arguments
dat.mat |
Matrix of data (features X samples). |
dense.map |
Flag to use dense UMAP. Default of TRUE. |
Value
Two column matrix with UMAP representation of samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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