kw_cluster_mrs: Identifies cluster-specific master regulators using a...
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
kw_cluster_mrs R Documentation
Identifies cluster-specific master regulators using a Kruskal-Wallis test.
Description
Identifies cluster-specific master regulators using a Kruskal-Wallis test.
Usage
kw_cluster_mrs(narnea.res, clust.vec, p.thresh = 0.05)
Arguments
narnea.res
NaRnEA result object with 'PES' and 'NES' members.
clust.vec
Vector of categorical labels.
p.thresh
p-value threshold for calling significant master regulators. Default of 0.05.
Value
A list; table of positive MRs ('positive') and negative MRs ('negative');
Kruskal-Wallis results ('kw.test') with log p-values and group residuals..
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| kw_cluster_mrs | R Documentation |
Identifies cluster-specific master regulators using a Kruskal-Wallis test.
Description
Identifies cluster-specific master regulators using a Kruskal-Wallis test.
Usage
kw_cluster_mrs(narnea.res, clust.vec, p.thresh = 0.05)
Arguments
narnea.res |
NaRnEA result object with 'PES' and 'NES' members. |
clust.vec |
Vector of categorical labels. |
p.thresh |
p-value threshold for calling significant master regulators. Default of 0.05. |
Value
A list; table of positive MRs ('positive') and negative MRs ('negative'); Kruskal-Wallis results ('kw.test') with log p-values and group residuals..
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.