cluster_pair_mr_volcano: Generates cluster-specific volcano plots from the given...

In califano-lab/PISCES: Protein Activity Inferecne in Single Cells

Generates cluster-specific volcano plots from the given master regulator object.

Description

Generates cluster-specific volcano plots from the given master regulator object.

Usage

cluster_pair_mr_volcano(mr.obj, clust.vec, num.mrs = 10)

Arguments

mr.obj	Master Regulator object generated by pairwise_cluster_mrs. Should be a list with a 'mr.narnea' element, containing cluster-v-cluster NaRnEA results (NES and PES matrices). Names should be structured as 'cn1.v.cn2'
clust.vec	Clustering vector.
num.mrs	Number of top / bottom MRs to label. Default of 10.

Value

A ggplot object.

califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.