Man pages for noriakis/wcGeneSummary
visualization and interpretation of textual information from omics summary data through network analysis

biotextgraphbiotextgraph
changeLayoutchangeLayout
compareWordNetcompareWordNet
connectGenesconnectGenes
convertMetaCycconvertMetaCyc
DimPlotWithTextsDimPlotWithTexts
enzymeenzyme
exportCyjsexportCyjs
exportCyjsWithoutImageexportCyjsWithoutImage
exportVisjsexportVisjs
exportWCNetworkexportWCNetwork
findTermfindTerm
generalfrefseq, alliance, pubmed, manual, bugsigdb
geom_node_shadowtextgeom_node_shadowtext
geom_sc_wordcloudgeom_sc_wordcloud
getSlotgetSlot
getSlot-biotext-methodgetSlot
getUPtaxgetUPtax
getWordsOnDendrogetWordsOnDendro
ggplot_add.geom_sc_wordcloudggplot_add.geom_sc_wordcloud
graph_clustergraph_cluster
makeBarmakeBar
make_corpusmake_corpus
makeCorpusmakeCorpus
make_graphmake_graph
make_TDMmake_TDM
obtain_allianceobtain_alliance
obtain_bugsigdbobtain_bugsigdb
obtain_enrichobtain_enrich
obtain_enzymeobtain_enzyme
obtain_manualobtain_manual
obtainMarkersWCobtainMarkersWC
obtainMarkersWCScranobtainMarkersWCScran
obtain_pubmedobtain_pubmed
obtain_refseqobtain_refseq
obtainTextPositionobtainTextPosition
parseMetaCycPathwayparseMetaCycPathway
perform_oraperform_ora
plot_biofabricplot_biofabric
plot_biotextgraphplot_biotextgraph
plotDynamicplotDynamic
plotEigengeneNetworksWithWordsplotEigengeneNetworksWithWords
plotnetplotNet
plotORAplotORA
plotReducedDimWithTextsplotReducedDimWithTexts
plotwcplotWC
plot_wordcloudplot_wordcloud
process_network_geneprocess_network_gene
process_network_manualprocess_network_manual
process_network_microbeprocess_network_microbe
refseqDESeq2refseqDESeq2
refseqWGCNArefseqWGCNA
returnExamplereturnExample
returnPreturnP
returnPyramidreturnPyramid
returnQuantedareturnQuanteda
returnSimreturnSim
set_filter_wordsset_filter_words
tag_wordstag_words
TextMarkersTextMarkers
TextMarkersScranTextMarkersScran
textORAtextORA
noriakis/wcGeneSummary documentation built on May 31, 2024, 4:42 p.m.