API for nimble
MCMC, Particle Filtering, and Programmable Hierarchical Modeling

Global functions
-Class Man page
ADNimbleList Man page
AF_slice Man page
BUGSdeclClass Man page
BUGSdeclClass-class Man page
BUGSdistToRdist Source code
BUGSmodel Source code
CAR-Normal Man page
CAR-Proper Man page
CAR_calcC Man page
CAR_calcCmatrix Man page
CAR_calcEVs2 Man page
CAR_calcEVs3 Man page
CAR_calcM Man page
CAR_calcNumIslands Man page
CAR_calcSubsetIndList Source code
CAR_checkConjugacy Source code
CAR_convertNeighborWeightLists Source code
CAR_convertWeightMatrix Source code
CAR_normal_checkAdjWeightsNum Source code
CAR_normal_checkNeighborIndWeightLists Source code
CAR_normal_processParams Source code
CAR_proper_checkAdjNumCM Source code
CAR_proper_checkNeighborIndList Source code
CAR_proper_processParams Source code
Categorical Man page
Cmatrix2mvOneVar Source code
CmodelBaseClass Man page
CmodelBaseClass-class Man page
CnimbleFunctionBase Man page
CnimbleFunctionBase-class Man page
Constraint Man page
Dirichlet Man page
EigenNewExpr Source code
Exponential Man page
Interval Man page
Inverse-Gamma Man page
Inverse-Wishart Man page
MCMCconf Man page
MCMCconf-class Man page
MCMCefficiencyHO Source code
MCMCefficiencyHOlist Source code
MCMCsuite Man page Source code
MCMCsuiteClass Man page
MCMCsuiteClass-class Man page
MSElossFunction Source code
MakeCustomModelClass Source code
ModifiedRmmParseKeywords2 Man page
Multinomial Man page
Multivariate-t Man page
MultivariateNormal Man page
RCfunction Source code
RMakeCustomModelClass Source code
RW Man page
RW_PF Man page
RW_PF_block Man page
RW_block Man page
RW_llFunction Man page
RW_llFunction_block Man page
RW_multinomial Man page
Rmatrix2mvOneVar Man page Source code
RmodelBaseClass Man page
RmodelBaseClass-class Man page
Rname2CppName Source code
RparseTree2ExprClasses Source code
TFize_oneStatement Source code
TfCollectPlaceholders Source code
TfTensorizeExpr Source code
Wishart Man page
[,CmodelValues-method Man page
[,CmodelValues-method,ANY,ANY Man page
[,CmodelValues-method,character,missing Man page
[,CmodelValues-method,character,missing,ANY-method Man page
[,distributionsClass-method Man page
[,modelValuesBaseClass-method Man page
[,numberedModelValuesAccessors-method Man page
[,numberedObjects-method Man page
[<-,CmodelValues-method Man page
[<-,modelValuesBaseClass-method Man page
[<-,numberedModelValuesAccessors-method Man page
[<-,numberedObjects-method Man page
[[,CNumericList-method Man page
[[,CmodelValues-method Man page
[[,RNumericList-method Man page
[[,conjugacyRelationshipsClass-method Man page
[[,distributionsClass-method Man page
[[,modelBaseClass-method Man page
[[,nimPointerList-method Man page
[[<-,CNumericList-method Man page
[[<-,CmodelValues-method Man page
[[<-,RNumericList-method Man page
[[<-,modelBaseClass-method Man page
[[<-,nimPointerList-method Man page
[[<-,nimbleFunctionList-method Man page
addArg Source code
addBlockFromCppName Source code
addDIB Source code
addDistList2matchFunctions Source code
addDynamicallyIndexedWrapping Source code
addIndentToList Source code
addIndexWrapping Source code
addMissingIndexingRecurse Source code
addModelDollarSign Source code
addMonitors Man page
addMonitors2 Man page
addNecessaryIndexingFromArgumentNumbers Source code
addNecessaryIndexingToNewNode Source code
addNecessarySetupCode Source code
addNewCode Source code
addRule Man page
addRuleToCodeBlock Source code
addSampler Man page
addSamplerToConf Source code
addSetupCodeNames Source code
addToTypeEnv Source code
addTransposeIfNeededForNonSeqBlock Source code
addUnknownIndexToVarName Source code
addUnknownIndexToVarNameInBracketExpr Source code
allParamEfficiencyComparisonComponent Source code
anyNonScalar Source code
areMVSymTabsEqual Source code
argType2symbol Source code
argType2symbolInternal Source code
argTypeList2symbolTable Source code
arithmeticOutputType Source code
array Man page
as.carAdjacency Man page Source code
as.carCM Man page Source code
as.matrix.CmodelValues Source code
as.matrix.modelValuesBaseClass Source code
asCol Man page Source code
asRow Man page Source code
assignLogProbName Source code
assignNumberedObject Source code
assignmentTypeWarn Source code
autoBlock Man page Source code
autoBlockParamDefaults Source code
blockIndexInfo Source code
buildAuxiliaryFilter Man page
buildBootstrapFilter Man page
buildCopyLineFromSEXP Source code
buildCopyLineToSEXP Source code
buildDerivMethods Source code
buildEnsembleKF Man page
buildIntermNone Source code
buildLiuWestFilter Man page
buildMCEM Man page Source code
buildMCMC Man page
buildModelInterface Source code
buildNeededObjects Source code
buildNimbleListInterface Source code
buildNimbleObjInterface Source code
buildSimpleIntermCall Source code
buildSymbolTable Source code
c Man page
cGetNRow Source code
calcCrossVal Source code
calcCrossValSD Source code
calcNodes Man page
calcNodesMV Man page
calc_dcatConjugacyContributions Man page
calc_dmnormAltParams Man page
calc_dmnormConjugacyContributions Man page
calc_dwishAltParams Man page
calculate Man page Source code
calculateDiff Man page Source code
carBounds Man page
carMaxBound Man page
carMinBound Man page
cat Man page
cc_checkLinearity Source code
cc_combineExprsAddition Source code
cc_combineExprsDivision Source code
cc_combineExprsMultiplication Source code
cc_combineExprsSubtraction Source code
cc_createStructureExpr Source code
cc_expandDetermNodesInExpr Source code
cc_getNodesInExpr Source code
cc_linkCheck Source code
cc_makeConjugateSamplerName Source code
cc_makeRDistributionName Source code
cc_makeSamplerTypeName Source code
cc_negateExpr Source code
cc_nodeInExpr Source code
cc_otherParamsCheck Source code
cc_vectorizedComponentCheck Source code
character2index Source code
checkConjugacy Man page
checkDistributionFunctions Source code
checkDistributionInput Source code
checkForDeterministicDorR Source code
checkForDuplicateNodeDeclaration Source code
checkInterrupt Man page Source code
checkNimbleFunctionListCpp Source code
checkNimbleOrRfunctionNames Source code
checkUserDefinedDistribution Source code
cleanWhite Source code
clearCompiled Source code
clearNeededObjects Source code
cloglog Man page Source code
code2Name_fromArgList Source code
codeBlockClass Man page
codeBlockClass-class Man page
codeProcessIfThenElse Source code
codeProcessModelMacros Source code
codeSubstitute Source code
collectEdges Source code
collectInferredVertexEdges Source code
combineIndices2Flat Source code
combine_MCMC_comparison_results Man page Source code
compareConjugacyLists Source code
compareMCMCs Man page Source code
compileNimble Man page Source code
configureMCMC Man page Source code
convertSplitVertexNamesToEvalSafeNames Source code
copierVector Source code
copy Man page
copyExprClass Source code
copyFromRobject Source code
copyFromRobjectViaActiveBindings Source code
countDllObjects Source code
cppDouble Source code
cppEigenMap Source code
cppInt Source code
cppLiteral Source code
cppMinusOne Source code
cppModelValuesAccessorVector Source code
cppModelValuesMapAccessorVector Source code
cppModelVariableAccessorVector Source code
cppModelVariableMapAccessorVector Source code
cppNewNimbleList Source code
cppNimArr Source code
cppNimArrPtr Source code
cppNimbleListReturningOperator Source code
cppNodeFunctionVector Source code
cppOutputBinaryOrUnary Source code
cppOutputBlank Source code
cppOutputBracket Source code
cppOutputCall Source code
cppOutputCallAsIs Source code
cppOutputCallWithName Source code
cppOutputCast Source code
cppOutputChainedCall Source code
cppOutputColon Source code
cppOutputComment Source code
cppOutputCout Source code
cppOutputCoutNoNewline Source code
cppOutputDereference Source code
cppOutputDerivDist Source code
cppOutputDoubleBracket Source code
cppOutputEigBlank Source code
cppOutputEigExternalUnaryFunction Source code
cppOutputEigMemberFunction Source code
cppOutputEigMemberFunctionNoTranslate Source code
cppOutputEigenCast Source code
cppOutputEigenMapAssign Source code
cppOutputFor Source code
cppOutputGetBound Source code
cppOutputGetNodeFunctionIndexedInfo Source code
cppOutputGetParam Source code
cppOutputIfWhile Source code
cppOutputLiteral Source code Source code
cppOutputMakeFixedVector Source code
cppOutputMemberData Source code
cppOutputMemberFunction Source code
cppOutputMemberFunctionDeref Source code
cppOutputMemberFunctionGeneric Source code
cppOutputMidOperator Source code
cppOutputNFmethod Source code
cppOutputNFvar Source code
cppOutputNext Source code
cppOutputNimFunListAccess Source code
cppOutputNimSwitch Source code
cppOutputNonNativeEigen Source code
cppOutputNumList Source code
cppOutputParen Source code
cppOutputPointerDereference Source code
cppOutputPow Source code
cppOutputPtrType Source code
cppOutputReturn Source code
cppOutputSize Source code
cppOutputSkip Source code
cppOutputTemplate Source code
cppOutputVoidPtr Source code
cppSEXP Source code
cppStrideType Source code
cppVarSym2templateTypeCppVarSym Source code
cppVecNimArr Source code
cppVecNimArrPtr Source code
cppVecVoidPtr Source code
cppVoid Source code
createDFfromABlist Source code
createDefault_isDataObj Source code
createDynamicConjugateSamplerName Source code
createNamedObjectsFromList Source code
crossLevel Man page
cube Man page Source code
dcar_normal Man page Source code
dcar_proper Man page Source code
dcat Man page Source code
dconstraint Man page Source code
ddirch Man page Source code
decide Man page Source code
decideAndJump Man page
declare Man page Source code
declareHandler Source code
defaultParamInfo Source code
deparse Source code
deregisterDistributions Man page Source code
detectDynamicIndexes Source code
detectNonscalarIndex Source code
determineContextSize Source code
determineNdimFromOneCase Source code
determineNdimsFromNfproc Source code
determineNodeIndexSizes Source code
dexp_nimble Man page Source code
dflat Man page Source code
dhalfflat Man page Source code
diag Man page
dim Man page
dimOrLength Source code
dinterval Man page Source code
dinvgamma Man page Source code
dinvwish_chol Man page Source code
dirichlet Man page
distributionInfo Man page
dmFunHandler Source code
dmnorm_chol Man page Source code
dmulti Man page Source code
dmvt_chol Man page Source code
dropSingleSizes Source code
dsqrtinvgamma Man page Source code
dt_nonstandard Man page Source code
dwish_chol Man page Source code
dynamicConjugateSamplerAdd Source code
dynamicConjugateSamplerExists Source code
dynamicConjugateSamplerGet Source code
dynamicConjugateSamplerWrite Source code
effectiveSizeHO Source code
effectiveSizeStan Source code
efficiencyDetailsComparisonComponent Source code
eigen Man page
eigenCast Source code
eigenNimbleList Man page
eigenizeArrayize Source code
eigenizeMatricize Source code
eigenizeName Source code
eigenizeNameStrided Source code
eigenize_alwaysMatrix Source code
eigenize_asRowOrCol Source code
eigenize_assign_before_recurse Source code
eigenize_cWiseAddSub Source code
eigenize_cWiseBinaryArray Source code
eigenize_cWiseBinaryArrayLogical Source code
eigenize_cWiseBinaryEitherMatch Source code
eigenize_cWiseBinaryMatrix Source code
eigenize_cWiseByScalarArray Source code
eigenize_cWiseMultDiv Source code
eigenize_cWiseUnaryArray Source code
eigenize_cWiseUnaryArray_external Source code
eigenize_cWiseUnaryEither Source code
eigenize_cWiseUnaryMatrix Source code
eigenize_chainedCall Source code
eigenize_coeffSetter Source code
eigenize_doNotRecurse Source code
eigenize_eigenBlock Source code
eigenize_matrixOps Source code
eigenize_nfVar Source code
eigenize_nimbleNullaryClass Source code
eigenize_nonSeq Source code
eigenize_recyclingRuleFunction Source code
eigenize_reductionArray Source code
eigenize_reductionBinaryEither Source code
eigenize_reductionEither Source code
embedInRbracket Source code
embedListInRbracket Source code
emptyTypeInfo Source code
evalBracketArgs Source code
evalBracketArgsKnownBracket Source code
evalInDistsMatchCallEnv Source code
example_fillInMissingIndices Source code
example_getMissingDimensions Source code
existsFunctionEnvVar Source code
expandContextAndReplacements Source code
expandIndexSet4sapply Source code
expandMVNames Source code
expit Man page Source code
exprAsListDrop2 Source code
exprClassProcessingErrorMsg Source code
exprClasses2serializedTF Source code
exprClasses_TFize Source code
exprClasses_addDebugMarks Source code
exprClasses_buildInterms Source code
exprClasses_eigenize Source code
exprClasses_initSizes Source code
exprClasses_insertAssertions Source code
exprClasses_labelForEigenization Source code
exprClasses_liftMaps Source code
exprClasses_processSpecificCalls Source code
exprClasses_setSizes Source code
exprClasses_setToEigenize Source code
exprName2Cpp Source code
extractAnyVectorizedIndexExprs Source code
extractFlatIndices_wVarInfo Source code
filenameFromSpecialHandling Source code
flat Man page
gd_allNeighbors Source code
gd_getDependencies_IDs Source code
genIndexVarValues_recurse Source code
genLocalMakevars Source code
genLogProbNodeExprAndReplacements Source code
genName2 Source code
genReplacementsAndCodeRecurse Source code
generalFunSizeHandler Source code
generalFunSizeHandlerFromSymbols Source code
generateAll Source code
generateClassHeader Source code
generateConditionalLines Source code
generateFunctionHeader Source code
generateObjectDefs Source code
generateRandomFoldFunction Source code
getAllDistributionsInfo Source code
getArgumentType Source code
getBUGSexampleDir Man page Source code
getBoolValue Source code
getBound Man page Source code
getCalcADFunName Source code
getCallText Source code
getCharacterValue Source code
getCharacterVectorValue Source code
getDefinition Man page Source code
getDependencies Man page
getDependencyPaths Source code
getDimension Man page Source code
getDistribution Man page
getDistributionInfo Man page Source code
getDistributionList Source code
getDoubleValue Source code
getFunctionEnvVar Source code
getIntValue Source code
getLoadingNamespace Man page Source code
getLogProb Man page Source code
getLogProbNodes Man page
getLogProbNodesMV Man page
getMVName Source code
getMVptr Source code
getMaxDim Source code
getModelValuesConf Source code
getMonitors Man page
getMonitors2 Man page
getNamedObjected Source code
getNimValues Source code
getNimbleFunctionEnvironment Source code
getNimbleOption Man page Source code
getNimbleProject Man page Source code
getNimbleTypes Source code
getNodeFunctionIndexedInfo Man page Source code
getNodeNames Man page
getNumberedObject Source code
getParam Man page Source code
getParamID Source code
getParamNames Man page Source code
getSamplers Man page
getSetCharacterScalar Source code
getSetCharacterVector Source code
getSetDoubleScalar Source code
getSetIntegerScalar Source code
getSetLogicalScalar Source code
getSetModelValues Source code
getSetModelValuesPtr Source code
getSetModelVarPtr Source code
getSetNimPtrList Source code
getSetNimbleFunction Source code
getSetNimbleList Source code
getSetNumericVector Source code
getSize_NumberedObjects Source code
getSymObj_recurse Source code
getSymbolicParentNodes Source code
getSymbolicParentNodesRecurse Source code
getType Man page Source code
getValueDim Source code
getValues Source code
getValuesAccess Source code
getVarAndIndices Source code
getVarNames Man page
getsize Man page Source code
halfflat Man page
handleScaleAndRateForExpNimble Source code
handleScaleAndRateForGamma Source code
hasBracket Source code
icloglog Man page Source code
identityAssert Source code
identityMatrix Man page
ilogit Man page Source code
indexedNodeInfoTableClass Source code
initializeInfo Man page
initializeModel Man page
inprod Man page Source code
insertEigenTranspose Source code
insertExprClassLayer Source code
insertIndexingBracket Source code
insertSingleIndexBrackets Source code
insertSubIndexExpr Source code
integer Man page
inverse Man page Source code
inverse-wishart Man page
iprobit Man page Source code
is.Cmodel Man page Source code
is.Cnf Man page Source code
is.Rmodel Man page Source code
is.blank Source code
is.indexed Source code
is.model Man page Source code
is.na.vec Source code
is.nan.vec Source code
is.nf Man page Source code
is.nfGenerator Source code
is.nl Man page Source code
is.nlGenerator Source code
is.rcf Source code
is.vectorized Source code
isBinary Man page
isCodeArgBlank Source code
isCodeScalar Source code
isData Man page
isDeterm Man page
isDiscrete Man page Source code
isDynamicIndex Source code
isEigScalar Source code
isEndNode Man page
isExprLiftable Source code
isIntegerEquivalent Source code
isMixedSizes Source code
isModelValuesConf Source code
isNameInExpr Source code
isNameInExprList Source code
isRbracket Source code
isSetupCodeGenerated Source code
isStoch Man page
isSymbolType Source code
isTruncated Man page
isUnivariate Man page
isUserDefined Man page Source code
isValid Source code
isVectorIndex Source code
labelFunctionMetaCreator Source code
length Man page
length.nimPointerList Source code
logdet Man page Source code
logfact Man page Source code
loggam Man page Source code
logical Man page
logit Man page Source code
makeADargumentTransferFunction Source code
makeADtapingFunction Source code
makeBUGSactiveBindingDef Source code
makeBUGSclassFields Source code
makeBoundInfo Man page Source code
makeCallList Source code
makeCopyFromRobjectDef Source code
makeCopyingCodeBlock Source code
makeCustomModelValuesClass Source code
makeDeclareSizeField Source code
makeDefaultDirName Source code
makeEigenArgsMatch Source code
makeEigenBlockExprFromBrackets Source code
makeEigenName Source code
makeEigenTypeLabel Source code
makeEnvName Source code
makeFillValue Source code
makeGetCodeFromAccessorVector Source code
makeIndexNamePieces Source code
makeIndexedVariable Source code
makeLogProbEnvName Source code
makeLogProbName Source code
makeMV_GID_Map Source code
makeMapAccessExpr Source code
makeMapExprFromBrackets Source code
makeMapInfoFromAccessorVector Source code
makeMapInfoFromAccessorVectorFaster Source code
makeMapSetupCodeNames Source code
makeModelBindingFields Source code
makeModelCppCopyTypes Source code
makeModelValuesClassFields Source code
makeNFBindingFields Source code
makeNameName Source code
makeNewConfFromOldConf Source code
makeNewNimListSEXPRESSIONFromC Source code
makeNimbleFxnCppCopyTypes Source code
makeNimbleFxnInterfaceCallMethodCode Source code
makeNimbleListBindingFields Source code
makeNimbleListTemplateWithBlankFirstArg Source code
makeOffsetRexpr Source code
makeParamInfo Man page Source code
makeReturnVector Source code
makeRowName Source code
makeSetCodeFromAccessorVector Source code
makeSingleCopyCall Source code
makeSingleIndexAccessCodeNames Source code
makeSingleIndexAccessExpr Source code
makeSizeAndDimList Source code
makeSizeExpressions Source code
makeSpaces Source code
makeSplitInfo Source code
makeStaticInitClass Source code
makeStrideRexprs Source code
makeTFsetupExprs Source code
makeTypeTemplateFunction Source code
makeVecName Source code
makeVertexNamesFromIndexArray2 Source code
make_MCMC_comparison_pages Man page Source code
make_example_html Source code
make_main Source code
matchAndFill.call Source code
matchKeywordCode Source code
matchKeywordCodeMemberFun Source code
matchKeywords_recurse Source code
matrix Man page
matrix2mv Source code
mcmc_generateControlListArgument Source code
mcmc_listContentsToStr Source code
mergeMultiLineStatements Source code
minMaxHandler Source code
minMeanAllComparisonComponent Source code
minMeanComparisonComponent Source code
modelBaseClass Man page
modelBaseClass-class Man page
modelDefClass Man page
modelDefClass-class Man page
modelValues Man page Source code
modelValuesAccessorVector Source code
modelValuesBaseClass Man page
modelValuesBaseClass-class Man page
modelValuesConf Man page Source code
modelValuesElement2Matrix Source code
modelVariableAccessorVector Source code
model_macro_builder Man page Source code
multiMaxSizeExprs Source code
multinomial Man page
multivariate-t Man page
mvAccessHandler Source code
mvt Man page
ndf_createDetermSimulate Source code
ndf_createSingleMethod Source code
ndf_createStochCalculate Source code
ndf_createStochCalculateTrunc Source code
ndf_createStochSimulate Source code
ndf_createStochSimulateTrunc Source code
ndf_createVirtualNodeFunctionDefinition Source code
ndf_createVirtualNodeFunctionDefinitionsList Source code
ndf_generateGetParamFunction Source code
newAssignmentExpression Source code
newBracketExpr Source code
newModel Man page
newNumberedObjects Source code
newObjElementPtr Source code
newSpacesFunction Source code
nfGetDefVar Source code
nfMethod Man page Source code
nfVar Man page Source code
nfVar<- Man page
nf_assignmentLHSvars Source code
nf_changeNimKeywords Source code
nf_changeNimKeywordsOne Source code
nf_checkDSLcode Source code
nf_createAList Source code
nf_createAllNamesFromMethodList Source code
nf_createGeneratorFunctionArgs Source code
nf_createGeneratorFunctionDef Source code
nf_createRefClassDef Source code
nf_createRefClassDef_fields Source code
nf_createSetupOutputNames Source code
nf_getGeneratorFunction Source code
nf_getInstances Source code
nf_getMethodList Source code
nf_getNamesFromSetupOutputDeclaration Source code
nf_getRefClassObject Source code
nf_getSetupOutputNames Source code
nf_getVarFromAssignmentLHScode Source code
nf_namesNotHidden Source code
nf_preProcessMemberDataObject Source code
nf_processSetupFunctionBody Source code
nf_substituteExceptFunctionsAndDollarSigns Source code
nimArrMapExpr Source code
nimArray Man page Source code
nimArrayGeneralHandler Source code
nimC Man page Source code
nimCat Man page Source code
nimCopy Man page Source code
nimDeparse Source code
nimDerivs Man page Source code
nimDim Man page Source code
nimEigen Man page Source code
nimEquals Man page Source code
nimGenerateCpp Source code
nimInteger Man page Source code
nimLogical Man page Source code
nimMatrix Man page Source code
nimNumeric Man page Source code
nimOptim Man page Source code
nimOptimDefaultControl Man page Source code
nimPrint Man page Source code
nimRep Man page Source code
nimRound Man page
nimSeq Man page Source code
nimStep Man page Source code
nimStop Man page Source code
nimSvd Man page Source code
nimSwitch Man page Source code
nimble Man page
nimble-R-functions Man page
nimble-package Man page
nimbleCode Man page Source code
nimbleExternalCall Man page Source code
nimbleFinalize Source code
nimbleFunction Man page Source code
nimbleFunctionBase Man page
nimbleFunctionBase-class Man page
nimbleFunctionList Man page
nimbleFunctionList-class Man page
nimbleFunctionVirtual Man page Source code
nimbleGeneralParseDeparse Source code
nimbleIncludeFile Source code
nimbleInternalFunctions Man page
nimbleList Man page Source code
nimbleMCMC Man page Source code
nimbleModel Man page Source code
nimbleOptions Man page Source code
nimbleRcall Man page Source code
nimbleTryGetNativeSymbolInfo Source code
nimbleType Man page
nimbleType-class Man page
nimbleType2argType Source code
nimbleType2symbol Source code
nimbleTypeList2argTypeList Source code
nimbleTypeList2symbolTable Source code
nimbleUserNamespace Man page
nl.getDefinitionContent Source code
nl.getGenerator Source code
nl.getListDef Source code
nl.getNestedGens Source code
nl_addIndicesToVariables Source code
nl_aggregateConsecutiveBlocks Source code
nl_checkNodeNamesInModel Source code
nl_checkVarNamesInModel Source code
nl_createVarsAndFlatIndexRanges Source code
nl_determineFlatIndex Source code
nl_expandNodeIndex Source code
nl_expandNodeIndexExpr Source code
nl_expandNodeNames Source code
nl_getVarNameFromNodeName Source code
nl_nodeVectorReadyNodes Source code
nl_removeNodeNamesNotInSymbolTable Source code
nl_vectorizedExpandNodeIndex Source code
nl_vectorizedExpandNodeIndexExprs Source code
nm_seq_noDecrease Source code
nndf_addArgInfoToCalcAD Source code
nndf_addModelDollarSignsToMethods Source code
nndf_createMethodList Source code
nndf_createSetupFunction Source code
nndf_extractNodeIndices Source code
nndf_generateDynamicIndexLimitsExpr Source code
nndf_generateGetBoundSwitchFunction Source code
nndf_generateGetParamSwitchFunction Source code
nndf_makeNodeFunctionIndexAccessCall Source code
nndf_makeNodeFunctionIndexLabels Source code
nndf_makeParentSizeExpr Source code
nndf_replaceSetupOutputsWithIndexedNodeInfo Source code
nodeFunctionNew Source code
nodeFunctionVector Source code
nodeFunctions Man page
numeric Man page
onAttach Source code
optimControlNimbleList Man page
optimDefaultControl Man page Source code
optimResultNimbleList Man page
outputCppArrayIndex2 Source code
outputCppBinaryOperation2 Source code
outputCppCommentBlock2 Source code
outputCppCout2 Source code
outputCppDereference2 Source code
outputCppExit2 Source code
outputCppFor2 Source code
outputCppIfElse2 Source code
outputCppLiteral Source code
outputCppOpenBracket2 Source code
outputCppOpenBracketInvisible Source code
outputCppOpenParentheses2 Source code
outputCppParseTree2 Source code
outputCppReference2 Source code
outputCppScopeResolution2 Source code
outputCppTempArray2 Source code
outputCppWhile2 Source code
outputEigenOperation2 Source code
outputGeneralCppFunction2 Source code
outputTypeCast2 Source code
parseEvalCharacter Source code
parseEvalCharacterMany Source code
parseEvalNumeric Source code
parseEvalNumericMany Source code
parseEvalNumericManyFindErrors Source code
parseEvalNumericManyHandleError Source code
parseEvalNumericManyList Source code
parseTreeSubstitute Source code
pasteSemicolon Source code
pexp_nimble Man page Source code
phi Man page Source code
pinvgamma Man page Source code
plotABS Source code
plotMinMeanAll Source code
pointAt Source code
populateCopierVector Source code
populateIndexedNodeInfoTable Source code
populateManyModelValuesMapAccess Source code
populateManyModelVarMapAccess Source code
populateNodeFxnVecNew Source code
posteriorSummaryComparisonComponent Source code
posterior_predictive Man page
pow Man page Source code
pqDefined Man page Source code
prepareDistributionInput Source code
print Man page
printMinTimeABS Source code
printMonitors Man page
printRules Man page
printSamplers Man page
probit Man page Source code
processDistributionAliases Source code
processKeyword Source code
processKeywordCodeMemberFun Source code
processKeywords_recurse Source code
processModelFile Source code
processMonitorNames Source code
processNonParseableCode Source code
processVarBlock Source code
productSizeExprs Source code
promoteArgTypes Source code
promoteTypes Source code
pt_nonstandard Man page Source code
putCodeLinesInBrackets Source code
qexp_nimble Man page Source code
qinvgamma Man page Source code
qt_nonstandard Man page Source code
rCalcDiffNodes Source code
rCalcNodes Source code
rFunHandler Source code
rGetLogProbsNodes Source code
rSimNodes Source code
rankSample Man page Source code
rcar_normal Man page Source code
rcar_proper Man page Source code
rcat Man page Source code
rconstraint Man page Source code
rdirch Man page Source code
readBUGSmodel Man page Source code
recurseGetListST Source code
recurseSetCppADExprs Source code
recurseSetSizes Source code
recurseSetToEigenize Source code
reduceDF Source code
registerDistributions Man page Source code
removeColonOperator Source code
removeExprClassLayer Source code
removeIndexing Source code
removeIndices Source code
removeLayerHandler Source code
removeLogProbName Source code
removeNonScalarElementsFromList Source code
removeSamplers Man page
rename_MCMC_comparison_method Man page Source code
reorder Man page
rep Man page
replaceAllCodeSuccessfully Source code
replaceConstantsRecurse Source code
replaceDistributionAliases Source code
replaceWhatWeCan Source code
replacementHandler Source code
reprioritizeColonOperator Source code
resetData Man page
resetLabelFunctionCreators Source code
resetMonitors Man page
reshape_comparison_results Man page Source code
resize Man page Source code
resize_NumberedObjects Source code
resolveOneUnknownType Source code
resolveUnknownTypes Source code
rexp_nimble Man page Source code
rflat Man page Source code
rhalfflat Man page Source code
rinterval Man page Source code
rinvgamma Man page Source code
rinvwish_chol Man page Source code
rmFunHandler Source code
rmnorm_chol Man page Source code
rmulti Man page Source code
rmvt_chol Man page Source code
rsqrtinvgamma Man page Source code
rt_nonstandard Man page Source code
run.time Man page Source code
runCrossValidate Man page Source code
runMCMC Man page Source code
rwish_chol Man page Source code
sameDir Source code
sampler Man page
samplerAssignmentRules Man page
samplerAssignmentRules-class Man page
sampler_AF_slice Man page
sampler_BASE Man page
sampler_CAR_normal Man page
sampler_CAR_proper Man page
sampler_RW Man page
sampler_RW_PF Man page
sampler_RW_PF_block Man page
sampler_RW_block Man page
sampler_RW_dirichlet Man page
sampler_RW_llFunction Man page
sampler_RW_llFunction_block Man page
sampler_RW_multinomial Man page
sampler_binary Man page
sampler_categorical Man page
sampler_crossLevel Man page
sampler_ess Man page
sampler_posterior_predictive Man page
sampler_slice Man page
samplers Man page
samplesSummary Man page Source code
seq Man page
seqAlongHandler Source code
setAndCalculate Man page
setAndCalculateDiff Man page
setAndCalculateOne Man page
setArg Source code
setAsRowOrCol Source code
setBoolValue Source code
setCaller Source code
setCharacterValue Source code
setCharacterVectorValue Source code
setData Man page
setDoublePtrFromSinglePtr Source code
setDoubleValue Source code
setInits Man page
setIntValue Source code
setNimValues Source code
setNimbleOption Source code
setOnePtrVectorOfPtrs Source code
setPtrVectorOfPtrs Source code
setReturnType Source code
setSamplers Man page
setSize Man page Source code
setSmartPtrFromDoublePtr Source code
setSmartPtrFromSinglePtr Source code
setThin Man page
setThin2 Man page
setValues Source code
setValuesAccess Source code
setupOutputs Man page Source code
simNodes Man page
simNodesMV Man page
simulate Man page Source code
singleModelValuesAccess Man page Source code
singleVarAccess Source code
singleVarAccessClass Man page
singleVarAccessClass-class Man page
sizeAsReturnSymbol Source code
sizeAsRowOrCol Source code
sizeAssign Source code
sizeAssignAfterRecursing Source code
sizeBinaryCwise Source code
sizeBinaryCwiseLogical Source code
sizeBinaryReduction Source code
sizeBinaryUnaryCwise Source code
sizeChainedCall Source code
sizeColonOperator Source code
sizeConcatenate Source code
sizeCppPointerDereference Source code
sizeDiagonal Source code
sizeDim Source code
sizeDoubleBracket Source code
sizeFor Source code
sizeGetBound Source code
sizeGetParam Source code
sizeIndexingBracket Source code
sizeInsertIntermediate Source code
sizeMatrixMult Source code
sizeMatrixSquareReduction Source code
sizeNFvar Source code
sizeNewNimbleList Source code
sizeNimArrayGeneral Source code
sizeNimDerivs Source code
sizeNimbleConvert Source code
sizeNimbleFunction Source code
sizeNimbleListReturningFunction Source code
sizeNimbleUnconvert Source code
sizeOneEigenCommand Source code
sizeOptim Source code
sizeOptimDefaultControl Source code
sizePROTECT Source code
sizeProxyForDebugging Source code
sizeRCfunction Source code
sizeRecyclingRule Source code
sizeRecyclingRuleRfunction Source code
sizeRep Source code
sizeResizeNoPtr Source code
sizeReturn Source code
sizeReval Source code
sizeRmultivarFirstArg Source code
sizeRunTime Source code
sizeScalar Source code
sizeScalarModelOp Source code
sizeScalarRecurse Source code
sizeSeq Source code
sizeSetSize Source code
sizeSimulate Source code
sizeSolveOp Source code
sizeSwitch Source code
sizeTranspose Source code
sizeUnaryCwise Source code
sizeUnaryCwiseSquare Source code
sizeUnaryNonaryCwise Source code
sizeUnaryReduction Source code
sizeUndefined Source code
sizeValues Source code
sizeVoidPtr Source code
sizeWhich Source code
sizeasDoublePtr Source code
sizeforceEigenize Source code
sizemap Source code
sizemvAccessBracket Source code
slice Man page
specialHandling Source code
spectrum0.ar.big Source code
splitCompletionForOrigNodes Source code
splitVertexIDsToElementIDs Source code
splitVertices Source code
stop Man page
stripArgs Source code
stripDynamicallyIndexedWrapping Source code
stripIndexWrapping Source code
stripPrefix Source code
stripUnknownIndexFromVarName Source code
stripUnknownIndexFromVarNameInBracketExpr Source code
svd Man page
svdHandler Source code
svdNimbleList Man page
symTypeFromSymTab Source code
symbolDouble Source code
symbolInt Source code
symbolTable2cppVars Source code
symbolTable2templateTypeSymbolTable Source code
t Man page
testBUGSmodel Man page Source code
tfTranslate Source code
timeComparisonComponent Source code
toEigenAssign Source code
toEigenAssignLHS Source code
toEigenBinaryCwise Source code
toEigenBinaryUnaryCwise Source code
toEigenChainedCall Source code
toEigenConcatenate Source code
toEigenCppPointerDereference Source code
toEigenFor Source code
toEigenGetBound Source code
toEigenGetParam Source code
toEigenIgnoreForNow Source code
toEigenInsertIntermediate Source code
toEigenMatrixMult Source code
toEigenMaybe Source code
toEigenNewNimbleList Source code
toEigenNimArrayGeneral Source code
toEigenNimbleFunction Source code
toEigenNo Source code Source code
toEigenOptim Source code
toEigenRCfunction Source code
toEigenRep Source code
toEigenScalarModelOp Source code
toEigenScalarRecurse Source code
toEigenSetSize Source code
toEigenUnaryCwise Source code
toEigenUnaryReduction Source code
toEigenUseRule Source code
toEigenValues Source code
toEigenYes Source code
topologicallySortNodes Man page
updateMCMCcomparisonWithHighOrderESS Man page Source code
usedInIndex Source code
valueInCompiledNimbleFunction Man page Source code
values Man page Source code
values<- Man page
varAndIndices2flatIndex Source code
varAndIndices2mapParts Source code
vectorIndex_2_flat Source code
which Man page
whyInvalid Source code
wishart Man page
withNimbleOptions Man page Source code
wrapAsNumeric Source code
writeCode Source code
nimble documentation built on Nov. 22, 2017, 5:06 p.m.