RegProcess: Processes ARACNe results into a regulon object compatible...
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
RegProcess R Documentation
Processes ARACNe results into a regulon object compatible with VIPER.
Description
Processes ARACNe results into a regulon object compatible with VIPER.
Usage
RegProcess(a.file, exp.mat, out.dir, out.name = ".")
Arguments
a.file
ARACNe final network .tsv.
exp.mat
Matrix of expression from which the network was generated (genes X samples).
out.dir
Output directory for networks to be saved to.
out.name
Optional argument for prefix of the file name.
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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| RegProcess | R Documentation |
Processes ARACNe results into a regulon object compatible with VIPER.
Description
Processes ARACNe results into a regulon object compatible with VIPER.
Usage
RegProcess(a.file, exp.mat, out.dir, out.name = ".")
Arguments
a.file |
ARACNe final network .tsv. |
exp.mat |
Matrix of expression from which the network was generated (genes X samples). |
out.dir |
Output directory for networks to be saved to. |
out.name |
Optional argument for prefix of the file name. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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