stouffer_cluster_mrs: Returns an MR object with MRs selected via Stouffer...
In califano-lab/PISCES: Protein Activity Inferecne in Single Cells
stouffer_cluster_mrs R Documentation
Returns an MR object with MRs selected via Stouffer integration.
Description
Returns an MR object with MRs selected via Stouffer integration.
Usage
stouffer_cluster_mrs(narnea.res, clust.vec, p.thresh = 0.05)
Arguments
narnea.res
NaRnEA result object with 'PES' and 'NES' members.
clust.vec
Vector of categorical labels.
p.thresh
p-value threshold for calling significant master regulators. Default of 0.05.
Value
A list; table of positive MRs ('positive') and negative MRs ('negative');
Stouffer integrated NaRnEA results by cluster ('cluster.narnea').
califano-lab/PISCES documentation built on Jan. 11, 2023, 5:34 a.m.
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| stouffer_cluster_mrs | R Documentation |
Returns an MR object with MRs selected via Stouffer integration.
Description
Returns an MR object with MRs selected via Stouffer integration.
Usage
stouffer_cluster_mrs(narnea.res, clust.vec, p.thresh = 0.05)
Arguments
narnea.res |
NaRnEA result object with 'PES' and 'NES' members. |
clust.vec |
Vector of categorical labels. |
p.thresh |
p-value threshold for calling significant master regulators. Default of 0.05. |
Value
A list; table of positive MRs ('positive') and negative MRs ('negative'); Stouffer integrated NaRnEA results by cluster ('cluster.narnea').
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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