TrialSize: R functions in Chapter 3,4,6,7,9,10,11,12,14,15
Version 1.3

functions and examples in Sample Size Calculation in Clinical Research.

AuthorEd Zhang ; Vicky Qian Wu ; Shein-Chung Chow ; Harry G.Zhang (Quality check) <ed.zhang.jr@gmail.com>
Date of publication2013-06-03 17:59:54
MaintainerVicky Qian Wu <wuqian7@gmail.com>
LicenseGPL (>= 2.15.1)
Version1.3
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("TrialSize")

Getting started

Package overview

Popular man pages

AB.withDescalation: A + B Escalation Design with Dose De-escalation
Carry.Over: Test the Carry-over effect
Cox.NIS: Test for non-inferiority/superiority in Cox PH model.
OneSampleProportion.NIS: One sample proportion test for Non-inferiority/Superiority
OneWayANOVA.pairwise: Pairwise Comparison for Multiple-Sample One-Way ANOVA
Stuart.Maxwell.Test: Stuart-Maxwell Test
TwoSampleProportion.NIS: Two sample proportion test for Non-Inferiority/Superiority
See all...

All man pages Function index File listing

Man pages

ABE: Average Bioequivalence
AB.withDescalation: A + B Escalation Design with Dose De-escalation
AB.withoutDescalation: A + B Escalation Design without Dose De-escalation
ANOVA.Repeat.Measure: ANOVA with Repeat Measures
Carry.Over: Test the Carry-over effect
Cochran.Armitage.Trend: Cochran-Armitage's Test for Trend
Cox.Equality: Test for equality in Cox PH model.
Cox.Equivalence: Test for Equivalence in Cox PH model.
Cox.NIS: Test for non-inferiority/superiority in Cox PH model.
CrossOver.ISV.Equality: Test for Equality of Intra-Subject Variabilities in Crossover...
CrossOver.ISV.Equivalence: Test for Similarity of Intra-Subject Variabilities in...
CrossOver.ISV.NIS: Test for Non-Inferiority/Superiority of Intra-Subject...
Dose.Min.Effect: Williams' Test for Minimum effective dose (MED)
Dose.Response.binary: Linear Contrast Test for Binary Dose Response Study
Dose.Response.Linear: Linear Contrast Test for Dose Response Study
Dose.Response.time.to.event: Linear Contrast Test for Time-to-Event Endpoint in dose...
Example.3.1.4: One Sample Mean Equality
gof.Pearson: Test Goodness of Fit by Pearson's Test
gof.Pearson.twoway: Test Goodness of Fit by Pearson's Test for two-way table
IBE: Individual Bioequivalence
InterSV.Equality: Test for Equality of Inter-Subject Variabilities
InterSV.NIS: Test for Equality of Inter-Subject Variabilities
ISCV.Equality: Test for Equality of Intra-Subject CVs
ISCV.Equivalence: Test for Equivalence of Intra-Subject CVs
ISCV.NIS: Test for Non-Inferiority/Superiority of Intra-Subject CVs
ISV.Equality: Test for Equality of Intra-Subject Variabilities
ISV.Equivalence: Test for Similarity of Intra-Subject Variabilities
ISV.NIS: Test for Non-Inferiority/Superiority of Intra-Subject...
McNemar.Test: McNemar Test in 2 by 2 table
MeanWilliamsDesign.Equality: Test for Equality in Multiple-Sample William Design
MeanWilliamsDesign.Equivalence: Test for Equivalence in Multiple-Sample William Design
MeanWilliamsDesign.NIS: Test for Non-Inferiority/Superiority in Multiple-Sample...
Multiple.Testing: Multiple Testing procedures
Nonpara.Independ: Test for independence for nonparametric study
Nonpara.One.Sample: One Sample Location problem in Nonparametric
Nonpara.Two.Sample: Two sample location problem for Nonparametric
OneSampleMean.Equality: One Sample Mean Test for Equality
OneSampleMean.Equivalence: One Sample Mean Test for Equivalence
OneSampleMean.NIS: One Sample Mean Test for Non-Inferiority/Superiority
OneSampleProportion.Equality: One sample proportion test for equality
OneSampleProportion.Equivalence: One sample proportion test for equivalence
OneSampleProportion.NIS: One sample proportion test for Non-inferiority/Superiority
OneSide.fixEffect: One-Sided Tests with fixed effect sizes
OneSide.varyEffect: One-Sided Tests with varying effect sizes
OneWayANOVA.pairwise: Pairwise Comparison for Multiple-Sample One-Way ANOVA
OneWayANOVA.PairwiseComparison: One-way ANOVA pairwise comparison
PBE: Population Bioequivalence
Propensity.Score.nostrata: Propensity Score ignoring strata
Propensity.Score.strata: Propensity Score with Stratas
QOL: Quality of life
QT.crossover: Crossover Design in QT/QTc Studies without covariates
QT.parallel: Parallel Group Design in QT/QTc Studies without covariates
QT.PK.crossover: Crossover Design in QT/QTc Studies with PK response as...
QT.PK.parallel: Parallel Group Design in QT/QTc Studies with PK response as...
RelativeRiskCrossOver.Equality: Relative Risk in Crossover Design test for Equality
RelativeRiskCrossOver.Equivalence: Relative Risk in Crossover Design test for Equivalence
RelativeRiskCrossOver.NIS: Relative Risk in Crossover Design test for...
RelativeRisk.Equality: Relative Risk in Parallel Design test for Equality
RelativeRisk.Equivalence: Relative Risk in Parallel Design test for Equivalence
RelativeRisk.NIS: Relative Risk in Parallel Design test for...
Sensitivity.Index: Calculate the power for Sensitivity Index
Stuart.Maxwell.Test: Stuart-Maxwell Test
TrialSize-package: Sample Size calculation in Clinical Research
TwoSampleCrossOver.Equality: Two Sample Crossover Design Test for Equality
TwoSampleCrossOver.Equivalence: Two Sample Crossover Design Test for Equivalence
TwoSampleCrossOver.NIS: Two Sample Crossover Design Test for...
TwoSampleMean.Equality: Two Sample Mean Test for Equality
TwoSampleMean.Equivalence: Two Sample Mean Test for Equivalence
TwoSampleMean.NIS: Two Sample Mean Test for Non-Inferiority/Superiority
TwoSampleProportion.Equality: Two sample proportion test for equality
TwoSampleProportion.Equivalence: Two sample proportion test for equivalence
TwoSampleProportion.NIS: Two sample proportion test for Non-Inferiority/Superiority
TwoSampleSeqCrossOver.Equality: Two sample proportion Crossover design test for equality
TwoSampleSeqCrossOver.Equivalence: Two sample proportion Crossover design test for equivalence
TwoSampleSeqCrossOver.NIS: Two sample proportion Crossover design for...
TwoSampleSurvival.Conditional: Test for two sample conditional data in exponential model for...
TwoSampleSurvival.Equality: Test for two sample equality in exponential model for...
TwoSampleSurvival.Equivalence: Test for two sample equivalence in exponential model for...
TwoSampleSurvival.NIS: Test for two sample Non-Inferiority/Superiority in...
TwoSide.fixEffect: Two-Sided Tests with fixed effect sizes
TwoSide.varyEffect: Two-Sided Tests with varying effect sizes
Vaccine.CEM: Composite Efficacy Measure(CEM) for Vaccine clinical trials.
Vaccine.ELDI: The evaluation of vaccine efficacy with Extremely Low Disease...
Vaccine.RDI: Reduction in Disease Incidence(RDI) for Vaccine clinical...
Vitro.BE: In Vitro Bioequivalence
WilliamsDesign.Equality: William Design test for equality
WilliamsDesign.Equivalence: Williams Design test for equivalence
WilliamsDesign.NIS: Williams Design test for Non-inferiority/Superiority

Functions

AB.withDescalation Man page Source code
AB.withoutDescalation Man page Source code
ABE Man page Source code
ANOVA.Repeat.Measure Man page Source code
Carry.Over Man page Source code
Cochran.Armitage.Trend Man page Source code
Cox.Equality Man page Source code
Cox.Equivalence Man page Source code
Cox.NIS Man page Source code
CrossOver.ISV.Equality Man page Source code
CrossOver.ISV.Equivalence Man page Source code
CrossOver.ISV.NIS Man page Source code
Dose.Min.Effect Man page Source code
Dose.Response.Linear Man page Source code
Dose.Response.binary Man page Source code
Dose.Response.time.to.event Man page Source code
Example.3.1.4 Man page
IBE Man page Source code
ISCV.Equality Man page Source code
ISCV.Equivalence Man page Source code
ISCV.NIS Man page Source code
ISV.Equality Man page Source code
ISV.Equivalence Man page Source code
ISV.NIS Man page Source code
InterSV.Equality Man page Source code
InterSV.NIS Man page Source code
McNemar.Test Man page Source code
MeanWilliamsDesign.Equality Man page Source code
MeanWilliamsDesign.Equivalence Man page Source code
MeanWilliamsDesign.NIS Man page Source code
Multiple.Testing Man page Source code
Nonpara.Independ Man page Source code
Nonpara.One.Sample Man page Source code
Nonpara.Two.Sample Man page Source code
OneSampleMean.Equality Man page Source code
OneSampleMean.Equivalence Man page Source code
OneSampleMean.NIS Man page Source code
OneSampleProportion.Equality Man page Source code
OneSampleProportion.Equivalence Man page Source code
OneSampleProportion.NIS Man page Source code
OneSide.fixEffect Man page Source code
OneSide.varyEffect Man page Source code
OneWayANOVA.PairwiseComparison Man page Source code
OneWayANOVA.pairwise Man page Source code
PBE Man page Source code
Propensity.Score.nostrata Man page Source code
Propensity.Score.strata Man page Source code
QOL Man page Source code
QT.PK.crossover Man page Source code
QT.PK.parallel Man page Source code
QT.crossover Man page Source code
QT.parallel Man page Source code
RelativeRisk.Equality Man page Source code
RelativeRisk.Equivalence Man page Source code
RelativeRisk.NIS Man page Source code
RelativeRiskCrossOver.Equality Man page Source code
RelativeRiskCrossOver.Equivalence Man page Source code
RelativeRiskCrossOver.NIS Man page Source code
Sensitivity.Index Man page Source code
Stuart.Maxwell.Test Man page Source code
TrialSize Man page
TrialSize-package Man page
TwoSampleCrossOver.Equality Man page Source code
TwoSampleCrossOver.Equivalence Man page Source code
TwoSampleCrossOver.NIS Man page Source code
TwoSampleMean.Equality Man page Source code
TwoSampleMean.Equivalence Man page Source code
TwoSampleMean.NIS Man page Source code
TwoSampleProportion.Equality Man page Source code
TwoSampleProportion.Equivalence Man page Source code
TwoSampleProportion.NIS Man page Source code
TwoSampleSeqCrossOver.Equality Man page Source code
TwoSampleSeqCrossOver.Equivalence Man page Source code
TwoSampleSeqCrossOver.NIS Man page Source code
TwoSampleSurvival.Conditional Man page Source code
TwoSampleSurvival.Equality Man page Source code
TwoSampleSurvival.Equivalence Man page Source code
TwoSampleSurvival.NIS Man page Source code
TwoSide.fixEffect Man page Source code
TwoSide.varyEffect Man page Source code
Vaccine.CEM Man page Source code
Vaccine.ELDI Man page Source code
Vaccine.RDI Man page Source code
Vitro.BE Man page Source code
WilliamsDesign.Equality Man page Source code
WilliamsDesign.Equivalence Man page Source code
WilliamsDesign.NIS Man page Source code
gof.Pearson Man page Source code
gof.Pearson.twoway Man page Source code

Files

MD5
src
src/TrialSize_main.cc
src/TrialSize.h
src/TrialSize.cc
R
R/WilliamsDesign.NIS.R
R/WilliamsDesign.Equivalence.R
R/WilliamsDesign.Equality.R
R/Vitro.BE.R
R/Vaccine.RDI.R
R/Vaccine.ELDI.R
R/Vaccine.CEM.R
R/TwoSide.varyEffect.R
R/TwoSide.fixEffect.R
R/TwoSampleSurvival.NIS.R
R/TwoSampleSurvival.Equivalence.R
R/TwoSampleSurvival.Equality.R
R/TwoSampleSurvival.Conditional.R
R/TwoSampleSeqCrossOver.NIS.R
R/TwoSampleSeqCrossOver.Equivalence.R
R/TwoSampleSeqCrossOver.Equality.R
R/TwoSampleProportion.NIS.R
R/TwoSampleProportion.Equivalence.R
R/TwoSampleProportion.Equality.R
R/TwoSampleMean.NIS.R
R/TwoSampleMean.Equivalence.R
R/TwoSampleMean.Equality.R
R/TwoSampleCrossOver.NIS.R
R/TwoSampleCrossOver.Equivalence.R
R/TwoSampleCrossOver.Equality.R
R/Stuart.Maxwell.Test.R
R/Sensitivity.Index.R
R/RelativeRiskCrossOver.NIS.R
R/RelativeRiskCrossOver.Equivalence.R
R/RelativeRiskCrossOver.Equality.R
R/RelativeRisk.NIS.R
R/RelativeRisk.Equivalence.R
R/RelativeRisk.Equality.R
R/QT.PK.parallel.R
R/QT.PK.crossover.R
R/QT.parallel.R
R/QT.crossover.R
R/QOL.R
R/Propensity.Score.strata.R
R/Propensity.Score.nostrata.R
R/PBE.R
R/OneWayANOVA.PairwiseComparison.R
R/OneWayANOVA.pairwise.R
R/OneSide.varyEffect.R
R/OneSide.fixEffect.R
R/OneSampleProportion.NIS.R
R/OneSampleProportion.Equivalence.R
R/OneSampleProportion.Equality.R
R/OneSampleMean.NIS.R
R/OneSampleMean.Equivalence.R
R/OneSampleMean.Equality.R
R/Nonpara.Two.Sample.R
R/Nonpara.One.Sample.R
R/Nonpara.Independ.R
R/Multiple.Testing.R
R/MeanWilliamsDesign.NIS.R
R/MeanWilliamsDesign.Equivalence.R
R/MeanWilliamsDesign.Equality.R
R/McNemar.Test.R
R/ISV.NIS.R
R/ISV.Equivalence.R
R/ISV.Equality.R
R/ISCV.NIS.R
R/ISCV.Equivalence.R
R/ISCV.Equality.R
R/InterSV.NIS.R
R/InterSV.Equality.R
R/IBE.R
R/gof.Pearson.twoway.R
R/gof.Pearson.R
R/Dose.Response.time.to.event.R
R/Dose.Response.Linear.R
R/Dose.Response.binary.R
R/Dose.Min.Effect.R
R/CrossOver.ISV.NIS.R
R/CrossOver.ISV.Equivalence.R
R/CrossOver.ISV.Equality.R
R/Cox.NIS.R
R/Cox.Equivalence.R
R/Cox.Equality.R
R/Cochran.Armitage.Trend.R
R/Carry.Over.R
R/ANOVA.Repeat.Measure.R
R/ABE.R
R/AB.withoutDescalation.R
R/AB.withDescalation.R
NAMESPACE
man
man/WilliamsDesign.NIS.Rd
man/WilliamsDesign.Equivalence.Rd
man/WilliamsDesign.Equality.Rd
man/Vitro.BE.Rd
man/Vaccine.RDI.Rd
man/Vaccine.ELDI.Rd
man/Vaccine.CEM.Rd
man/TwoSide.varyEffect.Rd
man/TwoSide.fixEffect.Rd
man/TwoSampleSurvival.NIS.Rd
man/TwoSampleSurvival.Equivalence.Rd
man/TwoSampleSurvival.Equality.Rd
man/TwoSampleSurvival.Conditional.Rd
man/TwoSampleSeqCrossOver.NIS.Rd
man/TwoSampleSeqCrossOver.Equivalence.Rd
man/TwoSampleSeqCrossOver.Equality.Rd
man/TwoSampleProportion.NIS.Rd
man/TwoSampleProportion.Equivalence.Rd
man/TwoSampleProportion.Equality.Rd
man/TwoSampleMean.NIS.Rd
man/TwoSampleMean.Equivalence.Rd
man/TwoSampleMean.Equality.Rd
man/TwoSampleCrossOver.NIS.Rd
man/TwoSampleCrossOver.Equivalence.Rd
man/TwoSampleCrossOver.Equality.Rd
man/TrialSize-package.Rd
man/Stuart.Maxwell.Test.Rd
man/Sensitivity.Index.Rd
man/RelativeRiskCrossOver.NIS.Rd
man/RelativeRiskCrossOver.Equivalence.Rd
man/RelativeRiskCrossOver.Equality.Rd
man/RelativeRisk.NIS.Rd
man/RelativeRisk.Equivalence.Rd
man/RelativeRisk.Equality.Rd
man/QT.PK.parallel.Rd
man/QT.PK.crossover.Rd
man/QT.parallel.Rd
man/QT.crossover.Rd
man/QOL.Rd
man/Propensity.Score.strata.Rd
man/Propensity.Score.nostrata.Rd
man/PBE.Rd
man/OneWayANOVA.PairwiseComparison.Rd
man/OneWayANOVA.pairwise.Rd
man/OneSide.varyEffect.Rd
man/OneSide.fixEffect.Rd
man/OneSampleProportion.NIS.Rd
man/OneSampleProportion.Equivalence.Rd
man/OneSampleProportion.Equality.Rd
man/OneSampleMean.NIS.Rd
man/OneSampleMean.Equivalence.Rd
man/OneSampleMean.Equality.Rd
man/Nonpara.Two.Sample.Rd
man/Nonpara.One.Sample.Rd
man/Nonpara.Independ.Rd
man/Multiple.Testing.Rd
man/MeanWilliamsDesign.NIS.Rd
man/MeanWilliamsDesign.Equivalence.Rd
man/MeanWilliamsDesign.Equality.Rd
man/McNemar.Test.Rd
man/ISV.NIS.Rd
man/ISV.Equivalence.Rd
man/ISV.Equality.Rd
man/ISCV.NIS.Rd
man/ISCV.Equivalence.Rd
man/ISCV.Equality.Rd
man/InterSV.NIS.Rd
man/InterSV.Equality.Rd
man/IBE.Rd
man/gof.Pearson.twoway.Rd
man/gof.Pearson.Rd
man/Example.3.1.4.Rd
man/Dose.Response.time.to.event.Rd
man/Dose.Response.Linear.Rd
man/Dose.Response.binary.Rd
man/Dose.Min.Effect.Rd
man/CrossOver.ISV.NIS.Rd
man/CrossOver.ISV.Equivalence.Rd
man/CrossOver.ISV.Equality.Rd
man/Cox.NIS.Rd
man/Cox.Equivalence.Rd
man/Cox.Equality.Rd
man/Cochran.Armitage.Trend.Rd
man/Carry.Over.Rd
man/ANOVA.Repeat.Measure.Rd
man/ABE.Rd
man/AB.withoutDescalation.Rd
man/AB.withDescalation.Rd
DESCRIPTION
data
data/Example.3.1.4.rda
TrialSize documentation built on May 20, 2017, 4:55 a.m.

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