TrialSize: R functions in Chapter 3,4,6,7,9,10,11,12,14,15

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functions and examples in Sample Size Calculation in Clinical Research.

Author
Ed Zhang ; Vicky Qian Wu ; Shein-Chung Chow ; Harry G.Zhang (Quality check) <ed.zhang.jr@gmail.com>
Date of publication
2013-06-03 17:59:54
Maintainer
Vicky Qian Wu <wuqian7@gmail.com>
License
GPL (>= 2.15.1)
Version
1.3

View on CRAN

Man pages

ABE
Average Bioequivalence
AB.withDescalation
A + B Escalation Design with Dose De-escalation
AB.withoutDescalation
A + B Escalation Design without Dose De-escalation
ANOVA.Repeat.Measure
ANOVA with Repeat Measures
Carry.Over
Test the Carry-over effect
Cochran.Armitage.Trend
Cochran-Armitage's Test for Trend
Cox.Equality
Test for equality in Cox PH model.
Cox.Equivalence
Test for Equivalence in Cox PH model.
Cox.NIS
Test for non-inferiority/superiority in Cox PH model.
CrossOver.ISV.Equality
Test for Equality of Intra-Subject Variabilities in Crossover...
CrossOver.ISV.Equivalence
Test for Similarity of Intra-Subject Variabilities in...
CrossOver.ISV.NIS
Test for Non-Inferiority/Superiority of Intra-Subject...
Dose.Min.Effect
Williams' Test for Minimum effective dose (MED)
Dose.Response.binary
Linear Contrast Test for Binary Dose Response Study
Dose.Response.Linear
Linear Contrast Test for Dose Response Study
Dose.Response.time.to.event
Linear Contrast Test for Time-to-Event Endpoint in dose...
Example.3.1.4
One Sample Mean Equality
gof.Pearson
Test Goodness of Fit by Pearson's Test
gof.Pearson.twoway
Test Goodness of Fit by Pearson's Test for two-way table
IBE
Individual Bioequivalence
InterSV.Equality
Test for Equality of Inter-Subject Variabilities
InterSV.NIS
Test for Equality of Inter-Subject Variabilities
ISCV.Equality
Test for Equality of Intra-Subject CVs
ISCV.Equivalence
Test for Equivalence of Intra-Subject CVs
ISCV.NIS
Test for Non-Inferiority/Superiority of Intra-Subject CVs
ISV.Equality
Test for Equality of Intra-Subject Variabilities
ISV.Equivalence
Test for Similarity of Intra-Subject Variabilities
ISV.NIS
Test for Non-Inferiority/Superiority of Intra-Subject...
McNemar.Test
McNemar Test in 2 by 2 table
MeanWilliamsDesign.Equality
Test for Equality in Multiple-Sample William Design
MeanWilliamsDesign.Equivalence
Test for Equivalence in Multiple-Sample William Design
MeanWilliamsDesign.NIS
Test for Non-Inferiority/Superiority in Multiple-Sample...
Multiple.Testing
Multiple Testing procedures
Nonpara.Independ
Test for independence for nonparametric study
Nonpara.One.Sample
One Sample Location problem in Nonparametric
Nonpara.Two.Sample
Two sample location problem for Nonparametric
OneSampleMean.Equality
One Sample Mean Test for Equality
OneSampleMean.Equivalence
One Sample Mean Test for Equivalence
OneSampleMean.NIS
One Sample Mean Test for Non-Inferiority/Superiority
OneSampleProportion.Equality
One sample proportion test for equality
OneSampleProportion.Equivalence
One sample proportion test for equivalence
OneSampleProportion.NIS
One sample proportion test for Non-inferiority/Superiority
OneSide.fixEffect
One-Sided Tests with fixed effect sizes
OneSide.varyEffect
One-Sided Tests with varying effect sizes
OneWayANOVA.pairwise
Pairwise Comparison for Multiple-Sample One-Way ANOVA
OneWayANOVA.PairwiseComparison
One-way ANOVA pairwise comparison
PBE
Population Bioequivalence
Propensity.Score.nostrata
Propensity Score ignoring strata
Propensity.Score.strata
Propensity Score with Stratas
QOL
Quality of life
QT.crossover
Crossover Design in QT/QTc Studies without covariates
QT.parallel
Parallel Group Design in QT/QTc Studies without covariates
QT.PK.crossover
Crossover Design in QT/QTc Studies with PK response as...
QT.PK.parallel
Parallel Group Design in QT/QTc Studies with PK response as...
RelativeRiskCrossOver.Equality
Relative Risk in Crossover Design test for Equality
RelativeRiskCrossOver.Equivalence
Relative Risk in Crossover Design test for Equivalence
RelativeRiskCrossOver.NIS
Relative Risk in Crossover Design test for...
RelativeRisk.Equality
Relative Risk in Parallel Design test for Equality
RelativeRisk.Equivalence
Relative Risk in Parallel Design test for Equivalence
RelativeRisk.NIS
Relative Risk in Parallel Design test for...
Sensitivity.Index
Calculate the power for Sensitivity Index
Stuart.Maxwell.Test
Stuart-Maxwell Test
TrialSize-package
Sample Size calculation in Clinical Research
TwoSampleCrossOver.Equality
Two Sample Crossover Design Test for Equality
TwoSampleCrossOver.Equivalence
Two Sample Crossover Design Test for Equivalence
TwoSampleCrossOver.NIS
Two Sample Crossover Design Test for...
TwoSampleMean.Equality
Two Sample Mean Test for Equality
TwoSampleMean.Equivalence
Two Sample Mean Test for Equivalence
TwoSampleMean.NIS
Two Sample Mean Test for Non-Inferiority/Superiority
TwoSampleProportion.Equality
Two sample proportion test for equality
TwoSampleProportion.Equivalence
Two sample proportion test for equivalence
TwoSampleProportion.NIS
Two sample proportion test for Non-Inferiority/Superiority
TwoSampleSeqCrossOver.Equality
Two sample proportion Crossover design test for equality
TwoSampleSeqCrossOver.Equivalence
Two sample proportion Crossover design test for equivalence
TwoSampleSeqCrossOver.NIS
Two sample proportion Crossover design for...
TwoSampleSurvival.Conditional
Test for two sample conditional data in exponential model for...
TwoSampleSurvival.Equality
Test for two sample equality in exponential model for...
TwoSampleSurvival.Equivalence
Test for two sample equivalence in exponential model for...
TwoSampleSurvival.NIS
Test for two sample Non-Inferiority/Superiority in...
TwoSide.fixEffect
Two-Sided Tests with fixed effect sizes
TwoSide.varyEffect
Two-Sided Tests with varying effect sizes
Vaccine.CEM
Composite Efficacy Measure(CEM) for Vaccine clinical trials.
Vaccine.ELDI
The evaluation of vaccine efficacy with Extremely Low Disease...
Vaccine.RDI
Reduction in Disease Incidence(RDI) for Vaccine clinical...
Vitro.BE
In Vitro Bioequivalence
WilliamsDesign.Equality
William Design test for equality
WilliamsDesign.Equivalence
Williams Design test for equivalence
WilliamsDesign.NIS
Williams Design test for Non-inferiority/Superiority

Files in this package

TrialSize
TrialSize/MD5
TrialSize/src
TrialSize/src/TrialSize_main.cc
TrialSize/src/TrialSize.h
TrialSize/src/TrialSize.cc
TrialSize/R
TrialSize/R/WilliamsDesign.NIS.R
TrialSize/R/WilliamsDesign.Equivalence.R
TrialSize/R/WilliamsDesign.Equality.R
TrialSize/R/Vitro.BE.R
TrialSize/R/Vaccine.RDI.R
TrialSize/R/Vaccine.ELDI.R
TrialSize/R/Vaccine.CEM.R
TrialSize/R/TwoSide.varyEffect.R
TrialSize/R/TwoSide.fixEffect.R
TrialSize/R/TwoSampleSurvival.NIS.R
TrialSize/R/TwoSampleSurvival.Equivalence.R
TrialSize/R/TwoSampleSurvival.Equality.R
TrialSize/R/TwoSampleSurvival.Conditional.R
TrialSize/R/TwoSampleSeqCrossOver.NIS.R
TrialSize/R/TwoSampleSeqCrossOver.Equivalence.R
TrialSize/R/TwoSampleSeqCrossOver.Equality.R
TrialSize/R/TwoSampleProportion.NIS.R
TrialSize/R/TwoSampleProportion.Equivalence.R
TrialSize/R/TwoSampleProportion.Equality.R
TrialSize/R/TwoSampleMean.NIS.R
TrialSize/R/TwoSampleMean.Equivalence.R
TrialSize/R/TwoSampleMean.Equality.R
TrialSize/R/TwoSampleCrossOver.NIS.R
TrialSize/R/TwoSampleCrossOver.Equivalence.R
TrialSize/R/TwoSampleCrossOver.Equality.R
TrialSize/R/Stuart.Maxwell.Test.R
TrialSize/R/Sensitivity.Index.R
TrialSize/R/RelativeRiskCrossOver.NIS.R
TrialSize/R/RelativeRiskCrossOver.Equivalence.R
TrialSize/R/RelativeRiskCrossOver.Equality.R
TrialSize/R/RelativeRisk.NIS.R
TrialSize/R/RelativeRisk.Equivalence.R
TrialSize/R/RelativeRisk.Equality.R
TrialSize/R/QT.PK.parallel.R
TrialSize/R/QT.PK.crossover.R
TrialSize/R/QT.parallel.R
TrialSize/R/QT.crossover.R
TrialSize/R/QOL.R
TrialSize/R/Propensity.Score.strata.R
TrialSize/R/Propensity.Score.nostrata.R
TrialSize/R/PBE.R
TrialSize/R/OneWayANOVA.PairwiseComparison.R
TrialSize/R/OneWayANOVA.pairwise.R
TrialSize/R/OneSide.varyEffect.R
TrialSize/R/OneSide.fixEffect.R
TrialSize/R/OneSampleProportion.NIS.R
TrialSize/R/OneSampleProportion.Equivalence.R
TrialSize/R/OneSampleProportion.Equality.R
TrialSize/R/OneSampleMean.NIS.R
TrialSize/R/OneSampleMean.Equivalence.R
TrialSize/R/OneSampleMean.Equality.R
TrialSize/R/Nonpara.Two.Sample.R
TrialSize/R/Nonpara.One.Sample.R
TrialSize/R/Nonpara.Independ.R
TrialSize/R/Multiple.Testing.R
TrialSize/R/MeanWilliamsDesign.NIS.R
TrialSize/R/MeanWilliamsDesign.Equivalence.R
TrialSize/R/MeanWilliamsDesign.Equality.R
TrialSize/R/McNemar.Test.R
TrialSize/R/ISV.NIS.R
TrialSize/R/ISV.Equivalence.R
TrialSize/R/ISV.Equality.R
TrialSize/R/ISCV.NIS.R
TrialSize/R/ISCV.Equivalence.R
TrialSize/R/ISCV.Equality.R
TrialSize/R/InterSV.NIS.R
TrialSize/R/InterSV.Equality.R
TrialSize/R/IBE.R
TrialSize/R/gof.Pearson.twoway.R
TrialSize/R/gof.Pearson.R
TrialSize/R/Dose.Response.time.to.event.R
TrialSize/R/Dose.Response.Linear.R
TrialSize/R/Dose.Response.binary.R
TrialSize/R/Dose.Min.Effect.R
TrialSize/R/CrossOver.ISV.NIS.R
TrialSize/R/CrossOver.ISV.Equivalence.R
TrialSize/R/CrossOver.ISV.Equality.R
TrialSize/R/Cox.NIS.R
TrialSize/R/Cox.Equivalence.R
TrialSize/R/Cox.Equality.R
TrialSize/R/Cochran.Armitage.Trend.R
TrialSize/R/Carry.Over.R
TrialSize/R/ANOVA.Repeat.Measure.R
TrialSize/R/ABE.R
TrialSize/R/AB.withoutDescalation.R
TrialSize/R/AB.withDescalation.R
TrialSize/NAMESPACE
TrialSize/man
TrialSize/man/WilliamsDesign.NIS.Rd
TrialSize/man/WilliamsDesign.Equivalence.Rd
TrialSize/man/WilliamsDesign.Equality.Rd
TrialSize/man/Vitro.BE.Rd
TrialSize/man/Vaccine.RDI.Rd
TrialSize/man/Vaccine.ELDI.Rd
TrialSize/man/Vaccine.CEM.Rd
TrialSize/man/TwoSide.varyEffect.Rd
TrialSize/man/TwoSide.fixEffect.Rd
TrialSize/man/TwoSampleSurvival.NIS.Rd
TrialSize/man/TwoSampleSurvival.Equivalence.Rd
TrialSize/man/TwoSampleSurvival.Equality.Rd
TrialSize/man/TwoSampleSurvival.Conditional.Rd
TrialSize/man/TwoSampleSeqCrossOver.NIS.Rd
TrialSize/man/TwoSampleSeqCrossOver.Equivalence.Rd
TrialSize/man/TwoSampleSeqCrossOver.Equality.Rd
TrialSize/man/TwoSampleProportion.NIS.Rd
TrialSize/man/TwoSampleProportion.Equivalence.Rd
TrialSize/man/TwoSampleProportion.Equality.Rd
TrialSize/man/TwoSampleMean.NIS.Rd
TrialSize/man/TwoSampleMean.Equivalence.Rd
TrialSize/man/TwoSampleMean.Equality.Rd
TrialSize/man/TwoSampleCrossOver.NIS.Rd
TrialSize/man/TwoSampleCrossOver.Equivalence.Rd
TrialSize/man/TwoSampleCrossOver.Equality.Rd
TrialSize/man/TrialSize-package.Rd
TrialSize/man/Stuart.Maxwell.Test.Rd
TrialSize/man/Sensitivity.Index.Rd
TrialSize/man/RelativeRiskCrossOver.NIS.Rd
TrialSize/man/RelativeRiskCrossOver.Equivalence.Rd
TrialSize/man/RelativeRiskCrossOver.Equality.Rd
TrialSize/man/RelativeRisk.NIS.Rd
TrialSize/man/RelativeRisk.Equivalence.Rd
TrialSize/man/RelativeRisk.Equality.Rd
TrialSize/man/QT.PK.parallel.Rd
TrialSize/man/QT.PK.crossover.Rd
TrialSize/man/QT.parallel.Rd
TrialSize/man/QT.crossover.Rd
TrialSize/man/QOL.Rd
TrialSize/man/Propensity.Score.strata.Rd
TrialSize/man/Propensity.Score.nostrata.Rd
TrialSize/man/PBE.Rd
TrialSize/man/OneWayANOVA.PairwiseComparison.Rd
TrialSize/man/OneWayANOVA.pairwise.Rd
TrialSize/man/OneSide.varyEffect.Rd
TrialSize/man/OneSide.fixEffect.Rd
TrialSize/man/OneSampleProportion.NIS.Rd
TrialSize/man/OneSampleProportion.Equivalence.Rd
TrialSize/man/OneSampleProportion.Equality.Rd
TrialSize/man/OneSampleMean.NIS.Rd
TrialSize/man/OneSampleMean.Equivalence.Rd
TrialSize/man/OneSampleMean.Equality.Rd
TrialSize/man/Nonpara.Two.Sample.Rd
TrialSize/man/Nonpara.One.Sample.Rd
TrialSize/man/Nonpara.Independ.Rd
TrialSize/man/Multiple.Testing.Rd
TrialSize/man/MeanWilliamsDesign.NIS.Rd
TrialSize/man/MeanWilliamsDesign.Equivalence.Rd
TrialSize/man/MeanWilliamsDesign.Equality.Rd
TrialSize/man/McNemar.Test.Rd
TrialSize/man/ISV.NIS.Rd
TrialSize/man/ISV.Equivalence.Rd
TrialSize/man/ISV.Equality.Rd
TrialSize/man/ISCV.NIS.Rd
TrialSize/man/ISCV.Equivalence.Rd
TrialSize/man/ISCV.Equality.Rd
TrialSize/man/InterSV.NIS.Rd
TrialSize/man/InterSV.Equality.Rd
TrialSize/man/IBE.Rd
TrialSize/man/gof.Pearson.twoway.Rd
TrialSize/man/gof.Pearson.Rd
TrialSize/man/Example.3.1.4.Rd
TrialSize/man/Dose.Response.time.to.event.Rd
TrialSize/man/Dose.Response.Linear.Rd
TrialSize/man/Dose.Response.binary.Rd
TrialSize/man/Dose.Min.Effect.Rd
TrialSize/man/CrossOver.ISV.NIS.Rd
TrialSize/man/CrossOver.ISV.Equivalence.Rd
TrialSize/man/CrossOver.ISV.Equality.Rd
TrialSize/man/Cox.NIS.Rd
TrialSize/man/Cox.Equivalence.Rd
TrialSize/man/Cox.Equality.Rd
TrialSize/man/Cochran.Armitage.Trend.Rd
TrialSize/man/Carry.Over.Rd
TrialSize/man/ANOVA.Repeat.Measure.Rd
TrialSize/man/ABE.Rd
TrialSize/man/AB.withoutDescalation.Rd
TrialSize/man/AB.withDescalation.Rd
TrialSize/DESCRIPTION
TrialSize/data
TrialSize/data/Example.3.1.4.rda