API for stringgaussnet
PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor
| Global functions | |
|---|---|
| DEGeneExpr | Man page Source code |
| DEGeneExpr.default | Man page Source code |
| FactorNetworks | Man page Source code |
| FactorNetworks.default | Man page Source code |
| FilterEdges | Man page Source code |
| FilterEdges.FactorNetworks | Man page Source code |
| FilterEdges.SIMoNeNet | Man page Source code |
| FilterEdges.ShortPathSTRINGNet | Man page Source code |
| MultiDEGeneExpr | Man page Source code |
| MultiDEGeneExpr.default | Man page Source code |
| MultiNetworks | Man page Source code |
| MultiNetworks.default | Man page Source code |
| SIMoNeNet | Man page Source code |
| SIMoNeNet.default | Man page Source code |
| STRINGNet | Man page Source code |
| STRINGNet.default | Man page Source code |
| ShortPathSTRINGNet | Man page Source code |
| ShortPathSTRINGNet.default | Man page Source code |
| SpADEGenes | Man page |
| SpADataExpression | Man page |
| SpASamples | Man page |
| WGCNANet | Man page Source code |
| WGCNANet.default | Man page Source code |
| addFactorGraphsToCytoscape | Man page Source code |
| addGraphToCytoscape | Man page Source code |
| addMultiGraphToCytoscape | Man page Source code |
| addNetworkStyle | Man page Source code |
| addSIMoNeNetMappings | Man page Source code |
| addSTRINGNetMappings | Man page Source code |
| addShortPathSTRINGNetMappings | Man page Source code |
| addSkeletonDefaults | Man page Source code |
| addSkeletonMappings | Man page Source code |
| addWGCNANetMappings | Man page Source code |
| applyLayout | Man page Source code |
| applyStyle | Man page Source code |
| as.igraph.stringgaussnet | Man page Source code |
| checkCytoscapeRunning | Man page Source code |
| compareFactorNetworks | Man page Source code |
| compareGaussNetworks | Man page Source code |
| computeCombinedScores | Man page Source code |
| computeSimilarities | Man page Source code |
| convertAliases | Man page Source code |
| convertToDistGraph | Man page Source code |
| export | Man page Source code |
| export.SIMoNeNet | Man page Source code |
| export.STRINGNet | Man page Source code |
| export.ShortPathSTRINGNet | Man page Source code |
| export.WGCNANet | Man page Source code |
| findShortestPathways | Man page Source code |
| getGenesInformations | Man page Source code |
| getMartDatasets | Man page Source code |
| getSIMoNeNet | Man page Source code |
| getSTRINGNet | Man page Source code |
| getShortestPaths | Man page Source code |
| getWGCNANet | Man page Source code |
| mapAttributes | Man page Source code |
| mergeFactorEdges | Man page Source code |
| mergeGaussEdges | Man page Source code |
| pickSIMoNeParam | Man page Source code |
| pickWGCNAParam | Man page Source code |
| plot.FactorNetworks | Man page Source code |
| plot.SIMoNeNet | Man page Source code |
| plot.WGCNANet | Man page Source code |
| print.DEGeneExpr | Man page Source code |
| print.FactorNetworks | Man page Source code |
| print.MultiDEGeneExpr | Man page Source code |
| print.MultiNetworks | Man page Source code |
| print.SIMoNeNet | Man page Source code |
| print.STRINGNet | Man page Source code |
| print.ShortPathSTRINGNet | Man page Source code |
| print.WGCNANet | Man page Source code |
| resetCytoscapeSession | Man page Source code |
| saveCytoscapeSession | Man page Source code |
| selectInteractionTypes | Man page Source code |
| stringgaussnet | Man page |
| stringgaussnet-package | Man page |
| summary.SIMoNeNet | Man page Source code |
| summary.STRINGNet | Man page Source code |
| summary.ShortPathSTRINGNet | Man page Source code |
| summary.WGCNANet | Man page Source code |
| toCytoscape | Man page Source code |
