| %>>% |
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| .onAttach |
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| .onLoad |
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| ====== |
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| AFROC |
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| AFROC_curve |
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| AFROC_limit |
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| Author_vs_classic_for_AUC |
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| BayesianFROC |
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| Chi_square_goodness_of_fit_in_case_of_MRMC_Posterior_Mean |
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| Close_all_graphic_devices |
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| ConfirmConvergence |
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| Confirm_hit_rates_are_correctly_made_in_case_of_MRMC |
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| CoronaVirus_Disease_2019 |
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| CoronaVirus_Disease_2019_prevalence |
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| Credible_Interval_for_curve |
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| DrawCurves |
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| DrawCurves_MRMC |
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| DrawCurves_MRMC_pairwise |
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| DrawCurves_MRMC_pairwise_BlackWhite |
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| DrawCurves_MRMC_pairwise_col |
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| DrawCurves_srsc |
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| Draw_AUC |
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| Draw_a_prior_sample |
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| Draw_a_simulated_data_set |
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| Draw_a_simulated_data_set_and_Draw_posterior_samples |
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| Draw_an_area_of_AUC_for_srsc |
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| Empirical_FROC_via_ggplot |
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| FROC_curve |
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| Phi |
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| Phi_inv |
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| ROC_curve |
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| ROC_data_creator |
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| ROC_data_creator2 |
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| R_hat_max |
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| Simulation_Based_Calibration_histogram |
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| Simulation_Based_Calibration_single_reader_single_modality_via_r |
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| Simulation_Based_Calibration_via_rstan_sbc_MRMC |
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| Stan_code_validation |
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| StatisticForANOVA |
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| TRUE.Counter.in.vector |
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| Test_Null_Hypothesis_that_all_modalities_are_same |
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| `%>>%` |
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| argMax |
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| argMin |
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| array |
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| array_easy_example |
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| array_of_hit_and_false_alarms_from_vector |
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| caseID_m_q_c_vector_from_NI_M_Q_C |
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| check_hit_is_less_than_NL |
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| check_rhat |
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| chi_square_at_replicated_data_and_MCMC_samples_MRMC |
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| chi_square_goodness_of_fit |
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| chi_square_goodness_of_fit_from_input_all_param |
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| chi_square_goodness_of_fit_from_input_all_param_MRMC |
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| clearWorkspace |
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| color_message |
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| compare |
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| comparison |
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| compile_all_models_in_pkg_BayesianFROC |
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| create_dataList_MRMC |
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| create_dataset |
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| css_shiny |
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| d |
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| dark_theme |
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| data.MultiReaderMultiModality |
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| data.SingleReaderSingleModality |
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| data.bad.fit |
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| data.hier.ficitious |
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| data.nonconverge.srsc |
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| dataList.Chakra.1 |
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| dataList.Chakra.1.with.explantation |
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| dataList.Chakra.2 |
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| dataList.Chakra.3 |
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| dataList.Chakra.4 |
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| dataList.Chakra.Web |
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| dataList.Chakra.Web.orderd |
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| dataList.High |
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| dataList.Low |
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| dataList.divergent.transition.in.case.of.srsc |
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| dataList.high.ability |
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| dataList.low.ability |
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| dataList.one.modality |
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| data_2modaities_2readers_3confidence |
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| data_generate_NaN_in_fit_with_iteration1111_seed1234 |
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| data_low_p_value |
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| data_much_low_p_value |
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| data_of_36_readers_and_a_single_modality |
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| dataset_creator_by_specifying_only_M_Q |
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| dataset_creator_for_many_Readers |
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| dataset_creator_new_version |
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| dcasewise |
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| dd |
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| dd.orderd |
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| ddd |
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| dddd |
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| ddddd |
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| dddddd |
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| ddddddd |
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| demo_Bayesian_FROC |
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| demo_Bayesian_FROC_without_pause |
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| dnorm_limit |
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| draw.CFP.CTP.from.dataList |
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| draw_ROC_Curve |
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| draw_ROC_Curve_from_fitted_model |
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| draw_latent_noise_distribution |
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| draw_latent_signal_distribution |
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| dz |
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| error_MRMC |
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| error_message |
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| error_message_on_imaging_device_rhat_values |
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| error_plot |
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| error_srsc |
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| error_srsc_error_visualization |
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| error_srsc_variance_visualization |
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| explanation_about_package_BayesianFROC |
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| explanation_for_what_curves_are_drawn |
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| extractAUC |
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| extract_EAP_CI |
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| extract_EAP_by_array |
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| extract_data_frame_from_dataList_MRMC |
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| extract_data_frame_from_dataList_srsc |
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| extract_estimates_MRMC |
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| extract_parameters_from_replicated_models |
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| false_and_its_rate_creator |
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| false_and_its_rate_creator_MRMC |
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| fffaaabbb |
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| file_remove |
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| fit_Bayesian_FROC |
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| fit_GUI |
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| fit_GUI_MRMC |
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| fit_GUI_MRMC_new |
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| fit_GUI_ROC |
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| fit_GUI_Shiny |
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| fit_GUI_Shiny_MRMC |
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| fit_GUI_dashboard |
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| fit_GUI_simple_from_apppp_file |
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| fit_MRMC |
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| fit_MRMC_casewise |
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| fit_MRMC_versionTWO |
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| fit_Null_hypothesis_model_to_ |
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| fit_a_model_to |
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| fit_srsc |
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| fit_srsc_ROC |
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| flat_one_par |
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| flatnames |
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| foo |
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| foo_of_a_List_of_Arrays |
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| fooo |
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| foooo |
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| from_array_to_vector |
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| get_posterior_variance |
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| get_samples_from_Posterior_Predictive_distribution |
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Source code
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| get_treedepth_threshold |
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| ggplotFROC |
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Source code
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| ggplotFROC.EAP |
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| give_name_srsc_CFP_CTP_vector |
Man page
Source code
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| give_name_srsc_data |
Man page
Source code
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| hit_generator_from_multinomial |
Man page
Source code
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| hit_rate_adjusted_from_the_vector_p |
Man page
Source code
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| hits_creator_from_rate |
Man page
Source code
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| hits_false_alarms_creator_from_thresholds |
Man page
Source code
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| hits_from_thresholds |
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| hits_rate_creator |
Man page
Source code
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| horizontal_from_vertical_in_each_case |
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Source code
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| initial_values_specification_for_stan_in_case_of_MRMC |
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| install_imports |
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| inv_Phi |
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| is_length_zero |
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| is_logical_0 |
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| is_na_in_vector |
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| is_na_list |
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| is_stanfitExtended |
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| layout |
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| m_q_c_vector_from_M_Q_C |
Man page
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| make_TeX |
Man page
Source code
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| make_true_parameter_MRMC |
Man page
Source code
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| metadata_srsc_per_image |
Man page
Source code
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| metadata_to_DrawCurve_MRMC |
Man page
Source code
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| metadata_to_fit_MRMC |
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Source code
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| metadata_to_fit_MRMC_casewise |
Man page
Source code
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| minimal_model_MRMC |
Source code
Source code
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| minimal_model_MRMC3 |
Source code
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| mu |
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| mu_truth |
Man page
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| mu_truth_creator_for_many_readers_MRMC_data |
Man page
Source code
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| name |
Source code
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| name_of_param_whose_Rhat_is_maximal |
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| names_argMax |
Man page
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| p |
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| p_truth |
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| p_value_of_the_Bayesian_sense_for_chi_square_goodness_of_fit |
Man page
Source code
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| pairs_plot_if_divergent_transition_occurred |
Man page
Source code
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| pause |
Man page
Source code
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| plot,ANY,ANY-method |
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| plot,stanfitExtended,missing-method |
Man page
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| plotFROC |
Man page
Source code
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| plot_FPF_TPF_via_dataframe_with_split_factor |
Man page
Source code
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| plot_FPF_and_TPF_from_a_dataset |
Man page
Source code
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| plot_ROC_empirical_curves |
Man page
Source code
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| plot_curve_and_hit_rate_and_false_rate_simultaneously |
Man page
Source code
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| plot_dataset_of_ppp |
Man page
Source code
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| plot_dataset_of_ppp_MRMC |
Man page
Source code
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| plot_empirical_FROC_curves |
Man page
Source code
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| plot_test |
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| pnorm_or_qnorm |
Man page
Source code
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| print,stanfitExtended-method |
Man page
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| print_minimal_reproducible_code_in_case_of_MRMC |
Man page
Source code
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| print_stanfitExtended |
Man page
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| priorResearch |
Man page
Source code
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| prior_predictor |
Man page
Source code
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| prior_print_MRMC |
Man page
Source code
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| prior_print_srsc |
Man page
Source code
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| rank_statistics_with_two_parameters |
Man page
Source code
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| replicate_MRMC_dataList |
Man page
Source code
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| replicate_model_MRMC |
Man page
Source code
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| sbcc |
Man page
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| seq_array_ind |
Man page
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| showGM |
Man page
Source code
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| show_codes_in_my_manuscript |
Man page
Source code
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| simple |
Source code
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| size_of_return_value |
Man page
Source code
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| small_margin |
Man page
Source code
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| snippet_for_BayesianFROC |
Man page
Source code
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| sortAUC |
Man page
Source code
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| stability_of_AUC_ranking_in_case_of_MRMC_data |
Source code
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| stan_model_of_sbc |
Man page
Source code
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| stan_trace_of_max_rhat |
Man page
Source code
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| stanfitExtended |
Man page
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| stanfit_from_its_inherited_class |
Man page
Source code
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| study |
Source code
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| summarize_MRMC |
Man page
Source code
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| summary_EAP_CI_srsc |
Man page
Source code
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| tabular |
Source code
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| tabular2 |
Source code
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| the_row_number_of_logical_vector |
Man page
Source code
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| to |
Man page
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| trace_Plot |
Man page
Source code
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| v |
Man page
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| v_truth |
Man page
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| v_truth_creator_for_many_readers_MRMC_data |
Man page
Source code
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| validation.dataset_MRMC |
Source code
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| validation.dataset_srsc |
Man page
Source code
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| validation.draw_srsc |
Man page
Source code
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| vector |
Man page
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| vertical_from_horizontal_in_each_case |
Man page
Source code
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| view_CFP_CTP_for_replicated_models |
Source code
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| viewdata |
Man page
Source code
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| viewdata_MRMC |
Man page
Source code
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| viewdata_MRMC_casewise |
Man page
Source code
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| viewdata_srsc |
Man page
Source code
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| waic |
Man page
Source code
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| z |
Man page
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| z_from_dz |
Man page
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| z_truth |
Man page
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