Files in gtexr

Query the GTEx Portal API

NEWS.md README.md R/get_genomic_features.R R/get_single_nucleus_gex.R R/get_sqtl_genes.R R/download.R R/gtexr_arguments.R R/validate_args.R R/get_clustered_median_exon_expression.R R/get_image.R R/get_exons.R R/get_linkage_disequilibrium_data.R R/gtex_query.R R/get_news_item.R R/get_median_gene_expression.R R/get_sample_datasets_endpoints.R R/get_expression_pca.R R/get_annotation.R R/get_fine_mapping.R R/get_significant_single_tissue_eqtls.R R/handle_http_errors.R R/calculate_expression_quantitative_trait_loci.R R/calculate_ieqtls.R R/get_single_nucleus_gex_summary.R R/get_significant_single_tissue_eqtls_by_location.R R/get_gene_search.R R/get_eqtl_genes.R R/get_independent_eqtl.R R/get_downloads_page_data.R R/get_subject.R R/get_clustered_median_junction_expression.R R/get_linkage_disequilibrium_by_variant_data.R R/get_variant.R R/get_significant_single_tissue_ieqtls.R R/get_functional_annotation.R R/get_median_exon_expression.R R/calculate_isqtls.R R/get_neighbor_gene.R R/get_service_info.R R/get_median_transcript_expression.R R/get_gwas_catalog_by_location.R R/get_sample_biobank_data.R R/gtexr-package.R R/get_clustered_median_transcript_expression.R R/get_top_expressed_genes.R R/get_clustered_median_gene_expression.R R/get_maintenance_message.R R/get_multi_tissue_eqtls.R R/get_collapsed_gene_model_exon.R R/get_full_get_collapsed_gene_model_exon.R R/get_transcripts.R R/get_gene_expression.R R/get_median_junction_expression.R R/get_dataset_info.R R/calculate_splicing_quantitative_trait_loci.R R/get_tissue_site_detail.R R/get_file_list.R R/get_significant_single_tissue_sqtls.R R/get_significant_single_tissue_isqtls.R R/utils.R R/get_genes.R R/get_variant_by_location.R inst/doc/gtexr.R inst/doc/developer_guide.R inst/doc/gtexr.Rmd inst/doc/developer_guide.Rmd inst/app/app.R tests/testthat.R tests/testthat/test-get_single_nucleus_gex_summary.R tests/testthat/test-get_functional_annotation.R tests/testthat/test-get_annotation.R tests/testthat/test-get_clustered_median_exon_expression.R tests/testthat/test-calculate_ieqtls.R tests/testthat/test-get_linkage_disequilibrium_data.R tests/testthat/test-get_downloads_page_data.R tests/testthat/test-get_median_transcript_expression.R tests/testthat/test-get_subject.R tests/testthat/test-utils.R tests/testthat/test-get_significant_single_tissue_eqtls.R tests/testthat/test-get_clustered_median_junction_expression.R tests/testthat/test-get_gwas_catalog_by_location.R tests/testthat/test-get_exons.R tests/testthat/test-get_transcripts.R tests/testthat/test-get_expression_pca.R tests/testthat/test-calculate_expression_quantitative_trait_loci.R tests/testthat/test-get_significant_single_tissue_eqtls_by_location.R tests/testthat/test-get_median_exon_expression.R tests/testthat/test-get_genomic_features.R tests/testthat/test-get_news_item.R tests/testthat/test-get_variant_by_location.R tests/testthat/test-get_significant_single_tissue_sqtls.R tests/testthat/test-get_image.R tests/testthat/test-get_sample_biobank_data.R tests/testthat/test-get_multi_tissue_eqtls.R tests/testthat/test-validate_args.R tests/testthat/test-get_linkage_disequilibrium_by_variant_data.R tests/testthat/test-gtex_query.R tests/testthat/test-get_variant.R tests/testthat/test-get_sample_datasets_endpoints.R tests/testthat/test-get_significant_single_tissue_ieqtls.R tests/testthat/test-get_sqtl_genes.R tests/testthat/test-get_neighbor_gene.R tests/testthat/test-get_single_nucleus_gex.R tests/testthat/test-download.R tests/testthat/test-get_top_expressed_genes.R tests/testthat/test-get_gene_expression.R tests/testthat/test-get_independent_eqtl.R tests/testthat/test-get_eqtl_genes.R tests/testthat/test-get_clustered_median_gene_expression.R tests/testthat/test-get_fine_mapping.R tests/testthat/test-calculate_splicing_quantitative_trait_loci.R tests/testthat/test-get_genes.R tests/testthat/test-get_dataset_info.R tests/testthat/test-get_collapsed_gene_model_exon.R tests/testthat/test-get_median_gene_expression.R tests/testthat/test-handle_http_errors.R tests/testthat/test-get_significant_single_tissue_isqtls.R tests/testthat/setup.R tests/testthat/test-calculate_isqtls.R tests/testthat/test-get_maintenance_message.R tests/testthat/test-get_tissue_site_detail.R tests/testthat/test-get_full_get_collapsed_gene_model_exon.R tests/testthat/test-get_median_junction_expression.R tests/testthat/get_significant_single_tissue_isqtls.R tests/testthat/test-get_gene_search.R tests/testthat/test-get_file_list.R tests/testthat/test-get_clustered_median_transcript_expression.R tests/testthat/handle_http_errors/gtexportal.org/api/v2/reference/gene-87a990.R tests/testthat/handle_http_errors/gtexportal.org/api/v2/association/dyneqtl-a0d4e4.R vignettes/gtexr.Rmd vignettes/developer_guide.Rmd man/calculate_ieqtls.Rd man/get_maintenance_message.Rd man/get_variant.Rd man/get_subject.Rd man/get_dataset_info.Rd man/get_top_expressed_genes.Rd man/get_clustered_median_junction_expression.Rd man/get_median_transcript_expression.Rd man/get_sample_datasets_endpoints.Rd man/get_collapsed_gene_model_exon.Rd man/get_linkage_disequilibrium_data.Rd man/get_sample_biobank_data.Rd man/get_median_junction_expression.Rd man/get_significant_single_tissue_isqtls.Rd man/get_tissue_site_detail.Rd man/get_significant_single_tissue_sqtls.Rd man/get_gwas_catalog_by_location.Rd man/get_functional_annotation.Rd man/get_multi_tissue_eqtls.Rd man/get_clustered_median_transcript_expression.Rd man/get_file_list.Rd man/calculate_expression_quantitative_trait_loci.Rd man/calculate_splicing_quantitative_trait_loci.Rd man/get_variant_by_location.Rd man/get_image.Rd man/get_annotation.Rd man/get_expression_pca.Rd man/get_median_gene_expression.Rd man/calculate_isqtls.Rd man/get_independent_eqtl.Rd man/get_neighbor_gene.Rd man/get_significant_single_tissue_eqtls_by_location.Rd man/get_single_nucleus_gex.Rd man/get_significant_single_tissue_ieqtls.Rd man/gtexr_arguments.Rd man/get_median_exon_expression.Rd man/download.Rd man/gtexr-package.Rd man/get_service_info.Rd man/get_fine_mapping.Rd man/get_exons.Rd man/get_genes.Rd man/get_sqtl_genes.Rd man/get_clustered_median_gene_expression.Rd man/get_transcripts.Rd man/get_clustered_median_exon_expression.Rd man/get_news_item.Rd man/get_gene_search.Rd man/get_eqtl_genes.Rd man/get_single_nucleus_gex_summary.Rd man/get_gene_expression.Rd man/get_genomic_features.Rd man/get_significant_single_tissue_eqtls.Rd man/get_full_get_collapsed_gene_model_exon.Rd man/get_downloads_page_data.Rd man/get_linkage_disequilibrium_by_variant_data.Rd