Files in nukappa/seurat_v2

Seurat : R toolkit for single cell genomics

R/RcppExports.R R/cluster_determination.R R/cluster_validation.R R/deprecated_functions.R R/seurat.R R/seuratFxns.R R/snn.R R/tSNE_project.R R/zfRenderSeurat.R README.md man/AddImputedScore.Rd man/AddMetaData.Rd man/AddSamples.Rd man/AddSmoothedScore.Rd man/AssessNodes.Rd man/AssessSplit.Rd man/AverageExpression.Rd man/AveragePCA.Rd man/BatchGene.Rd man/BuildClusterTree.Rd man/BuildRFClassifier.Rd man/BuildSNN.Rd man/CellPlot.Rd man/ClassifyCells.Rd man/ClusterAlpha.Rd man/ColorTSNESplit.Rd man/DBClustDimension.Rd man/DiffExpTest.Rd man/DiffTTest.Rd man/DimPlot.Rd man/DoHeatmap.Rd man/DoKMeans.Rd man/DotPlot.Rd man/FeatureHeatmap.Rd man/FeaturePlot.Rd man/FetchData.Rd man/FindAllMarkers.Rd man/FindAllMarkersNode.Rd man/FindClusters.Rd man/FindMarkers.Rd man/FindMarkersNode.Rd man/FitGeneK.Rd man/GenePlot.Rd man/GetCentroids.Rd man/HeatmapNode.Rd man/ICA.Rd man/ICAPlot.Rd man/ICHeatmap.Rd man/ICTopGenes.Rd man/InitialMapping.Rd man/JackStraw.Rd man/JackStrawPlot.Rd man/KClustDimension.Rd man/LogNormalize.Rd man/MakeSparse.Rd man/MarkerTest.Rd man/MeanVarPlot.Rd man/MergeNode.Rd man/MergeSeurat.Rd man/NegBinomDETest.Rd man/PCA.Rd man/PCAFast.Rd man/PCAPlot.Rd man/PCASigGenes.Rd man/PCElbowPlot.Rd man/PCHeatmap.Rd man/PCTopCells.Rd man/PCTopGenes.Rd man/PlotClusterTree.Rd man/PlotNoiseModel.Rd man/PoissonDETest.Rd man/PrintPCA.Rd man/ProjectPCA.Rd man/Read10X.Rd man/RefinedMapping.Rd man/RegressOut.Rd man/RenameIdent.Rd man/ReorderIdent.Rd man/RunDiffusion.Rd man/RunTSNE.Rd man/SampleUMI.Rd man/ScaleData.Rd man/SetAllIdent.Rd man/SetIdent.Rd man/Setup.Rd man/Seurat-deprecated.Rd man/StashIdent.Rd man/SubsetCells.Rd man/SubsetData.Rd man/TSNEPlot.Rd man/TobitTest.Rd man/ValidateClusters.Rd man/ValidateSpecificClusters.Rd man/VizClassification.Rd man/VizICA.Rd man/VizPCA.Rd man/VlnPlot.Rd man/WhichCells.Rd man/seurat.Rd tests/testthat.R tests/testthat/test_seurat_object.R