| assembliesbyestaccession | Find EST Clusters by EST accession |
| assembliesbygeneids | Find EST assemblies by gene id(s). |
| assembliesbylibrary | Find EST Assemblies by Library Name |
| assembliesbylocation | Find EST Assemblies that are located in a specified genomic... |
| assembliesbysimilarity | Find EST assemblies that have BLAST similarity to your input... |
| assemblieswithgeneoverlap | Find EST assemblies that do or do not overlap with a gene. |
| bergheigenesbyexpressionpercentile | Find genes expressed in late schizont, ring, early... |
| estbysourceid | Find ESTs by ID |
| estsbygeneids | Find ESTs by gene id(s). |
| estsbylibrary | Find ESTs by Library Name |
| estsbylocation | Find ESTs that are located in a specified genomic region. |
| estsbysimilarity | Find ESTs that have BLAST similarity to your input sequence. |
| estswithgeneoverlap | Find ESTs in a Library that do or do not overlap with a gene. |
| genebylocustag | Find a gene by its ID. |
| genebysinglelocustag | Find a gene by its ID. |
| genesbybindingsitefeature | Find Genes which have a specified transcription factor... |
| genesbycentromereproximity | Find genes within a given distance from an annotated... |
| genesbychipchipplasmo | Find genes with evidence for expression based on ChIP-chip... |
| genesbychipchiptoxo | Find genes with evidence for expression based on ChIP-chip... |
| genesbycowmansir2foldchange | Find genes that are differentially expressed between <i>P.... |
| genesbycowmansir2percentile | Array data from wild type and two Sir2 KO lines |
| genesbydifferentialmeanexpression | Find genes by differential expression (fold-change) in Sir2... |
| genesbyecnumber | Find genes by assigned Enzyme Commission (EC) number. |
| genesbyehistolyticaexpressiontiming | Find <i>E. histolytica</i> genes based on microarray... |
| genesbyestoverlap | Find genes with evidence of expression based on expressed... |
| genesbyexoncount | Find genes having a given number of exons. |
| genesbyexportprediction | Find genes that are predicted by ExportPred to produce an... |
| genesbyexpressionpercentile | Find genes expressed in early ring, late ring, early... |
| genesbyexpressionpercentilea | Find genes by expression percentile from Sir2 KO and invasion... |
| genesbyexpressionpercentilebrucei5stg | Find <i>T.brucei</i> genes based on your specified expression... |
| genesbyexpressionpercentilelinfantum | Find <i>L.infantum</i> genes based on your specified... |
| genesbyexpressionpercentiletbrucei | Find <i>T.brucei</i> genes based on your specified expression... |
| genesbyexpressionpercentiletcruzi | Find <i>T. cruzi</i> genes based on your specified expression... |
| genesbyexpressiontiming | Find genes with peaks or troughs occuring within specified... |
| genesbyfunctionalinteraction | Find genes of <i>P. falciparum</i> (strain HB3) identified by... |
| genesbygametocyteexpression | Find genes by percentile protein expression in gametocytes. |
| genesbygametocyteexprfoldchange | Find genes that are differentially expressed in different... |
| genesbygenetype | Find genes by type of product made (eg, protein coding, tRNA,... |
| genesbygoterm | Find genes by Gene Ontology (GO) term for molecular function,... |
| genesbyinterprodomain | Find genes containing a specified protein domain from the... |
| genesbyisoelectricpoint | Find genes whose protein product has an isoelectric point in... |
| genesbykappefoldchange | Find genes by several 2 state comparisons of parasites liver,... |
| genesbylocation | Find genes that are located in a specified genomic region. |
| genesbymassspec | Find <i>E. histolytica</i>, <i>C. parvum</i>,<i>G.... |
| genesbymetabolicpathway | Find genes involved in a specific metabolic pathway. |
| genesbymicroarrpagelinfantum | Identify L.infantum genes based on microarray comparisons of... |
| genesbymicroarrpagelinfantumpct | Find <i>L. infantum</i> genes based on your specified... |
| genesbymicroarrpagelmajor | Identify L.major genes based on compared expression values at... |
| genesbymicroarrpagelmajorpct | Find <i>L. major</i> genes based on your specified expression... |
| genesbymicroarrpagetbrucei | Identify <i>T.brucei</i> genes based on fold change... |
| genesbymicroarrpagetcruzi | Identify <i>T.cruzi</i> genes based on fold change expression... |
| genesbymicroarr_tbdrbd3 | Identify <i>T.brucei</i> genes based on the comparison of... |
| genesbymolecularweight | Find genes whose unmodified protein product has a molecular... |
| genesbymotifsearch | Find genes whose protein product contains a motif pattern... |
| genesbymr4reagents | Find genes that have available reagents. |
| genesbynonnuclearlocation | Find genes that are encoded in a specified region of the... |
| genesbyoldannotation | Find genes that have modified annotation based on the recent... |
| genesbyorthologpattern | Find genes that have a specified orthology-based phylogenetic... |
| genesbypdbsimilarity | Find genes whose protein product has high BLAST similarity to... |
| genesbyphenotype | Find T. brucei genes based on phenotype. |
| genesbyphyleticprofile | Find genes that have a homology-based phylogenetic profile... |
| genesbyphylogenetictree | Find G. lamblia genes that have computed phylogenetic trees... |
| genesbyprofilesimilarity | Find genes that have a similar expression profile to your... |
| genesbypromastigotetimeseries | Find <i>L.infantum</i> genes based on expression differences... |
| genesbyproteinproteininteraction | Find interacting partners of a specific gene as determined by... |
| genesbyproteomicsprofile | Find <i>P. berghei</i> genes with the specified protein... |
| genesbyringqvistfoldchange | Find genes that are differentially expressed based on growth... |
| genesbyringqvistpercentile | Find genes based on your specified expression percentile and... |
| genesbyrnaseqexpressionfoldchange | Find <i>T. brucei</i> genes that are differentially expressed... |
| genesbyrnaseqexpressionpercentile | Find <i>T. brucei</i> genes based on percentile expression as... |
| genesbyrnaseqexpressiontiming | Find <i>P. falciparum</i> genes having RNA expression peaks... |
| genesbyrnaseqpfexpressionfoldchange | Find <i>P. falciparum</i> genes that are differentially... |
| genesbyrnaseqpfrbcexprnpercentile | Find <i>P. falciparum</i> genes based on percentile... |
| genesbyrnaseqpfrbcfoldchange | Find <i>P. falciparum</i> genes that are differentially... |
| genesbysagetag | Find genes with evidence of expression based on SAGE tag... |
| genesbysagetagrstat | Find genes with evidence of differential expression based on... |
| genesbysecondarystructure | Find genes whose proteins are predicted to have the given... |
| genesbysimilarity | Find genes that have BLAST similarity to your input sequence. |
| genesbysnps | Find genes which have SNPs meeting specific criteria... |
| genesbysubcellularlocalization | Find genes targeted to the apicoplast or the RBC membrane. |
| genesbysucqpage | Find P.f. genes that are differentially regulated during... |
| genesbysucqpercentile | In this study three isogenic lines of <i>P. falciparum</i>... |
| genesbytaxon | Find all genes from one or more species. |
| genesbytbruceitimeseries | Identify <i>T.brucei</i> based on fold change expression... |
| genesbytelomereproximity | Find genes within a given distance from the start and end... |
| genesbytextsearch | Find genes with a text search against their product name,... |
| genesbytgvegrnaseqexpressionfoldchange | Find <i>T. gondii</i> and/or <i>Neospora caninum</i> genes... |
| genesbytgvegrnaseqexpressionpercentile | Find <i>T. gondii</i> and/or <i>Neospora caninum</i>genes... |
| genesbytimeseriesfoldchangebradyboothroyd | Identify genes induced under bradyzoite conditions (alkaline... |
| genesbytimeseriesfoldchangebradyfl | Identify genes induced under bradyzoite conditions (CO2... |
| genesbytimeseriesfoldchangebradyroos | Identify genes induced under bradyzoite conditions (alkaline... |
| genesbytoxocellcyclefoldchange | Find genes that show expression fold change differences along... |
| genesbytoxocellcyclespline | Find genes having RNA expression peaks or troughs occuring... |
| genesbytoxoprofilesimilarity | Find genes that have a similar expression profile to your... |
| genesbytransmembranedomains | Find genes with at least a given number of transmembrane... |
| genesbyvivaxexpressiontiming | Find <i>P. vivax</i> genes with peaks or troughs occuring... |
| genesbywatersdifferentialexpression | Find genes by differential expression in DOZI mutant vs. WT... |
| genesorthologoustoagivengene | Find genes that have been identified by the OrthoMCL project... |
| geneswithepitopes | Find genes whose encoding protein has an epitope identified... |
| geneswithsignalpeptide | Find genes that are predicted to encode a signal peptide... |
| geneswithstructureprediction | Find P.f. genes that have computationally predicted 3D... |
| geneswithupdatedannotation | Find genes for which the annotation has been updated at... |
| giardiagenesbydifferentialexpression | Find genes by differential expression analysis |
| giardiagenesbydifferentialexpressiontwo | Find genes by differential expression analysis |
| giardiagenesbyexpressionpercentileprofile | Find genes by expression percentile analysis |
| giardiagenesbyexpressionpercentileprofiletwo | Find genes by expression percentile analysis |
| giardiagenesfoldchangetwo | Find genes by differential expression analysis |
| gssbysimilarity | Find Genome Survey Sequences that have BLAST similarity to... |
| isolatebyauthor | Find Isolates by author. |
| isolatebycountry | Find isolates by country and/or continent. |
| isolatebygenotypenumber | Find isolates by genotype number. |
| isolatebyhost | Find isolates by host name. |
| isolatebyisolateid | Find Isolates by ID. |
| isolatebyisolationsource | Find isolates by isolation source. |
| isolatebyproduct | Find isolates by product name. |
| isolatebyrflpgenotype | Find isolates by RFLP genotype. |
| isolatebystudy | Find isolates by study name. |
| isolatebytaxon | Find isolates from one or more species. |
| isolatesbysimilarity | Find Isolates that have BLAST similarity to your input... |
| isolatesbytextsearch | Find isolates with a text search against their reference or... |
| orfbyorfid | Find ORFs by ID. |
| orfsbylocation | Find Orfs that are located in a specified genomic region. |
| orfsbymassspec | Find open reading frames that have evidence of expression... |
| orfsbymotifsearch | Find orfs with a motif pattern that you specify, e.g.: two... |
| orfsbysimilarity | Find ORFs that have BLAST similarity to your input sequence. |
| ParameterOptions | Documentation for the Options for Parameters in WADL methods |
| sagetagbyexpressionlevel | Find SAGE Tags By Expression Level in a given library. |
| sagetagbygenesourceid | Find SAGE Tags in GiardiaDB, PlasmoDB and ToxoDB By Gene... |
| sagetagbylocation | Find SAGE Tags that are located in a specified genomic... |
| sagetagbyradsourceid | Find SAGE Tags in GiardiaDB, PlasmoDB and ToxoDB by ID |
| sagetagbyrstat | Find SAGE Tags that are differentially expressed across 2 or... |
| sagetagbysequence | Find SAGE Tags Alignments By their Sequence. |
| sequencebysourceid | Find genomic sequences by ID. |
| sequencesbysimilarity | Find genomic sequences that have BLAST similarity to your... |
| sequencesbytaxon | Find genomic sequences of a species. |
| snpbysourceid | Find SNPs by ID |
| snpsbyallelefrequency | Find <i>P. falciparum</i> SNPs by the frequency of the minor... |
| snpsbygeneid | Find SNPs that are located in a specified gene. |
| snpsbyisolatepattern | Find SNPs that distinguish two sets of isolates. |
| snpsbyisolatetype | Find SNPs that are being used for isolate typing. |
| snpsbylocation | Find SNPs by chromosomal location |
| toxogenesbydifferentialexpression | Identify tachyzoite expression differences between any two of... |
| toxogenesbydifferentialexpressionchoosecomparisons | Identify tachyzoite expression differences between any two of... |
| toxogenesbydifferentialmeanexpression | Identify genes induced under bradyzoite conditions (48 hr;... |
| toxogenesbyexpressionpercentile | Identify genes by microarray expression percentile rank... |
