Files in nimble
MCMC, Particle Filtering, and Programmable Hierarchical Modeling
configure
MD5
README.md
NAMESPACE
configure.ac
DESCRIPTION
LICENSE
cleanup.win
configure.win
cleanup
INSTALL
R/RCfunction_compile.R
R/genCpp_maps.R
R/BUGS_contexts.R
R/NF_utils.R
R/externalCalls.R
R/genCpp_sizeProcessing.R
R/genCpp_generateCpp.R
R/options.R
R/genCpp_exprClass.R
R/nimbleProject.R
R/distributions_implementations.R
R/MCEM_build.R
R/cppDefs_utils.R
R/nimble-package.r
R/cppInterfaces_models.R
R/BUGS_utils.R
R/config.R
R/MCMC_utils.R
R/genCpp_insertAssertions.R
R/types_util.R
R/types_nimbleFunctionList.R
R/RCfunction_core.R
R/BNP_distributions.R
R/MCMC_run.R
R/BUGS_modelDef.R
R/makevars.R
R/setNimbleInternalFunctions.R
R/MCMC_conjugacy.R
R/cppDefs_BUGSmodel.R
R/distributions_inputList.R
R/registration.R
R/BUGS_macros.R
R/nimbleFunction_core.R
R/types_modelValuesAccessor.R
R/Laplace.R
R/cppDefs_RCfunction.R
R/nimbleFunction_Rexecution.R
R/genCpp_operatorLists.R
R/types_modelValues.R
R/BUGS_readBUGS.R
R/MCMC_autoBlock.R
R/nimbleFunction_util.R
R/cppDefs_nimbleList.R
R/genCpp_RparseTree2exprClasses.R
R/BUGS_BUGSdecl.R
R/nimbleFunction_nodeFunctionNew.R
R/initializeModel.R
R/MCMC_WAIC.R
R/cppInterfaces_utils.R
R/BUGS_testBUGS.R
R/miscFunctions.R
R/BNP_samplers.R
R/cppInterfaces_nimbleFunctions.R
R/nimbleFunction_Rderivs.R
R/genCpp_eigenization.R
R/types_nodeFxnVector.R
R/cppDefs_core.R
R/parameterTransform.R
R/CAR.R
R/BUGS_graphNodeMaps.R
R/cppDefs_variables.R
R/types_symbolTable.R
R/types_modelVariableAccessor.R
R/cppInterfaces_otherTypes.R
R/MCMC_RJ.R
R/genCpp_processSpecificCalls.R
R/types_numericLists.R
R/cppDefs_namedObjects.R
R/nimbleList_core.R
R/cppDefs_nimbleFunction.R
R/nimbleFunction_keywordProcessing.R
R/cppDefs_modelValues.R
R/BUGS_mathCompatibility.R
R/genCpp_liftMaps.R
R/BUGS_model.R
R/MCMC_samplers.R
R/config.R.in
R/zzz.R
R/cppDefs_cppProject.R
R/BUGS_nimbleGraph.R
R/nimbleFunction_compile.R
R/genCpp_addDebugMarks.R
R/all_utils.R
R/nimbleFunction_nodeFunction.R
R/cppDefs_outputCppFromRparseTree.R
R/crossValidation.R
R/QuadratureGrids.R
R/MCMC_configuration.R
R/MCMC_build.R
R/genCpp_toEigenize.R
R/genCpp_initSizes.R
R/cppDefs_ADtools.R
R/genCpp_buildIntermediates.R
R/BUGS_getDependencies.R
R/cppInterfaces_modelValues.R
R/distributions_processInputList.R
src/Makevars.win
src/Makevars.in
src/nimble.cpp
src/DO_NOT_PUT_CODE_HERE_DO_IN_INST_CPPCODE
inst/NEWS.md
inst/COPYRIGHTS
inst/CITATION
inst/include/cppad_notes_for_nimble.txt
inst/include/nimble_ADbase_tape_link_extensions.hpp
inst/include/ad.hpp
inst/include/atomic_index.hpp
inst/include/nimble_atomic_index.hpp
inst/include/tape_link.hpp
inst/include/nimble_ADbase_extensions.hpp
inst/include/nimble/nimDists.h
inst/include/nimble/RcppNimbleUtils.h
inst/include/nimble/EigenTypedefs.h
inst/include/nimble/nimOptim.h
inst/include/nimble/nimDerivs_atomic_backsolve.h
inst/include/nimble/accessorClasses.h
inst/include/nimble/Model.h
inst/include/nimble/eigenUsingClasses.h
inst/include/nimble/nimDerivs_atomic_pow_int.h
inst/include/nimble/nimDerivs_atomic_solve_base.h
inst/include/nimble/nodeFun.h
inst/include/nimble/nimDerivs_vecmat_utils.h
inst/include/nimble/nimDerivs_atomic_zround.h
inst/include/nimble/nimDerivs_dists.h
inst/include/nimble/NimArr.h
inst/include/nimble/nimbleGraph.h
inst/include/nimble/ModelClassUtils.h
inst/include/nimble/nimbleCppADbaseClass.cpp
inst/include/nimble/nimDerivs_atomic_cache.h
inst/include/nimble/nimDerivs_atomic_discrete.h
inst/include/nimble/Utils.h
inst/include/nimble/predefinedNimbleLists.h
inst/include/nimble/nimDerivs_atomic_matinverse.h
inst/include/nimble/Values.h
inst/include/nimble/nimDerivs_atomic_cholesky.h
inst/include/nimble/dynamicRegistrations.h
inst/include/nimble/nimDerivs_atomic_log_pow_int.h
inst/include/nimble/nimbleCppAD.h
inst/include/nimble/nimDerivs_atomic_classes.h
inst/include/nimble/dists.h
inst/include/nimble/nimbleEigenNimArr.h
inst/include/nimble/nimDerivs_atomic_probit.h
inst/include/nimble/RcppUtils.h
inst/include/nimble/smartPtrs.h
inst/include/nimble/dllFinalizer.h
inst/include/nimble/nimDerivs_atomic_dyn_ind.h
inst/include/nimble/nimIntegrate.h
inst/include/nimble/nimDerivs_atomic_forwardsolve.h
inst/include/nimble/NimArrBase.h
inst/include/nimble/NamedObjects.h
inst/include/nimble/nimbleCppADbaseClass.h
inst/include/nimble/nimbleEigen.h
inst/include/nimble/nimDerivs_atomic_matmult.h
inst/include/Eigen/IterativeLinearSolvers
inst/include/Eigen/SparseCholesky
inst/include/Eigen/SparseCore
inst/include/Eigen/Eigenvalues
inst/include/Eigen/OrderingMethods
inst/include/Eigen/Jacobi
inst/include/Eigen/UmfPackSupport
inst/include/Eigen/SVD
inst/include/Eigen/SPQRSupport
inst/include/Eigen/SuperLUSupport
inst/include/Eigen/LU
inst/include/Eigen/Eigen
inst/include/Eigen/SparseLU
inst/include/Eigen/Dense
inst/include/Eigen/CholmodSupport
inst/include/Eigen/Geometry
inst/include/Eigen/PardisoSupport
inst/include/Eigen/MetisSupport
inst/include/Eigen/QR
inst/include/Eigen/SparseQR
inst/include/Eigen/Cholesky
inst/include/Eigen/KLUSupport
inst/include/Eigen/Core
inst/include/Eigen/PaStiXSupport
inst/include/Eigen/StdDeque
inst/include/Eigen/Householder
inst/include/Eigen/Sparse
inst/include/Eigen/StdVector
inst/include/Eigen/QtAlignedMalloc
inst/include/Eigen/StdList
inst/include/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h
inst/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h
inst/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h
inst/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h
inst/include/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h
inst/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h
inst/include/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h
inst/include/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h
inst/include/Eigen/src/misc/lapack.h
inst/include/Eigen/src/misc/lapacke.h
inst/include/Eigen/src/misc/lapacke_mangling.h
inst/include/Eigen/src/misc/Image.h
inst/include/Eigen/src/misc/blas.h
inst/include/Eigen/src/misc/Kernel.h
inst/include/Eigen/src/misc/RealSvd2x2.h
inst/include/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h
inst/include/Eigen/src/SparseCholesky/SimplicialCholesky.h
inst/include/Eigen/src/SparseCore/SparseMatrix.h
inst/include/Eigen/src/SparseCore/SparseVector.h
inst/include/Eigen/src/SparseCore/SparseMatrixBase.h
inst/include/Eigen/src/SparseCore/SparseSelfAdjointView.h
inst/include/Eigen/src/SparseCore/SparseRef.h
inst/include/Eigen/src/SparseCore/SparseAssign.h
inst/include/Eigen/src/SparseCore/SparseMap.h
inst/include/Eigen/src/SparseCore/TriangularSolver.h
inst/include/Eigen/src/SparseCore/SparseTriangularView.h
inst/include/Eigen/src/SparseCore/SparseCwiseUnaryOp.h
inst/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h
inst/include/Eigen/src/SparseCore/AmbiVector.h
inst/include/Eigen/src/SparseCore/SparsePermutation.h
inst/include/Eigen/src/SparseCore/SparseTranspose.h
inst/include/Eigen/src/SparseCore/SparseRedux.h
inst/include/Eigen/src/SparseCore/CompressedStorage.h
inst/include/Eigen/src/SparseCore/SparseBlock.h
inst/include/Eigen/src/SparseCore/SparseSolverBase.h
inst/include/Eigen/src/SparseCore/SparseColEtree.h
inst/include/Eigen/src/SparseCore/SparseDenseProduct.h
inst/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h
inst/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h
inst/include/Eigen/src/SparseCore/SparseUtil.h
inst/include/Eigen/src/SparseCore/SparseDot.h
inst/include/Eigen/src/SparseCore/SparseCompressedBase.h
inst/include/Eigen/src/SparseCore/SparseFuzzy.h
inst/include/Eigen/src/SparseCore/SparseProduct.h
inst/include/Eigen/src/SparseCore/MappedSparseMatrix.h
inst/include/Eigen/src/SparseCore/SparseDiagonalProduct.h
inst/include/Eigen/src/SparseCore/SparseView.h
inst/include/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h
inst/include/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h
inst/include/Eigen/src/Eigenvalues/RealQZ.h
inst/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h
inst/include/Eigen/src/Eigenvalues/ComplexSchur.h
inst/include/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h
inst/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h
inst/include/Eigen/src/Eigenvalues/RealSchur.h
inst/include/Eigen/src/Eigenvalues/ComplexEigenSolver.h
inst/include/Eigen/src/Eigenvalues/EigenSolver.h
inst/include/Eigen/src/Eigenvalues/Tridiagonalization.h
inst/include/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h
inst/include/Eigen/src/Eigenvalues/HessenbergDecomposition.h
inst/include/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h
inst/include/Eigen/src/OrderingMethods/Amd.h
inst/include/Eigen/src/OrderingMethods/Eigen_Colamd.h
inst/include/Eigen/src/OrderingMethods/Ordering.h
inst/include/Eigen/src/Jacobi/Jacobi.h
inst/include/Eigen/src/UmfPackSupport/UmfPackSupport.h
inst/include/Eigen/src/SVD/SVDBase.h
inst/include/Eigen/src/SVD/UpperBidiagonalization.h
inst/include/Eigen/src/SVD/BDCSVD.h
inst/include/Eigen/src/SVD/JacobiSVD_LAPACKE.h
inst/include/Eigen/src/SVD/JacobiSVD.h
inst/include/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h
inst/include/Eigen/src/SuperLUSupport/SuperLUSupport.h
inst/include/Eigen/src/LU/InverseImpl.h
inst/include/Eigen/src/LU/PartialPivLU_LAPACKE.h
inst/include/Eigen/src/LU/PartialPivLU.h
inst/include/Eigen/src/LU/FullPivLU.h
inst/include/Eigen/src/LU/Determinant.h
inst/include/Eigen/src/LU/arch/InverseSize4.h
inst/include/Eigen/src/SparseLU/SparseLU_pivotL.h
inst/include/Eigen/src/SparseLU/SparseLU_pruneL.h
inst/include/Eigen/src/SparseLU/SparseLU_kernel_bmod.h
inst/include/Eigen/src/SparseLU/SparseLU.h
inst/include/Eigen/src/SparseLU/SparseLU_panel_dfs.h
inst/include/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h
inst/include/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h
inst/include/Eigen/src/SparseLU/SparseLU_relax_snode.h
inst/include/Eigen/src/SparseLU/SparseLU_column_dfs.h
inst/include/Eigen/src/SparseLU/SparseLU_panel_bmod.h
inst/include/Eigen/src/SparseLU/SparseLU_Structs.h
inst/include/Eigen/src/SparseLU/SparseLU_Memory.h
inst/include/Eigen/src/SparseLU/SparseLUImpl.h
inst/include/Eigen/src/SparseLU/SparseLU_Utils.h
inst/include/Eigen/src/SparseLU/SparseLU_column_bmod.h
inst/include/Eigen/src/SparseLU/SparseLU_gemm_kernel.h
inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h
inst/include/Eigen/src/CholmodSupport/CholmodSupport.h
inst/include/Eigen/src/StlSupport/StdDeque.h
inst/include/Eigen/src/StlSupport/StdVector.h
inst/include/Eigen/src/StlSupport/StdList.h
inst/include/Eigen/src/StlSupport/details.h
inst/include/Eigen/src/Geometry/EulerAngles.h
inst/include/Eigen/src/Geometry/Translation.h
inst/include/Eigen/src/Geometry/RotationBase.h
inst/include/Eigen/src/Geometry/Homogeneous.h
inst/include/Eigen/src/Geometry/AngleAxis.h
inst/include/Eigen/src/Geometry/OrthoMethods.h
inst/include/Eigen/src/Geometry/ParametrizedLine.h
inst/include/Eigen/src/Geometry/Transform.h
inst/include/Eigen/src/Geometry/Hyperplane.h
inst/include/Eigen/src/Geometry/Umeyama.h
inst/include/Eigen/src/Geometry/Quaternion.h
inst/include/Eigen/src/Geometry/Scaling.h
inst/include/Eigen/src/Geometry/AlignedBox.h
inst/include/Eigen/src/Geometry/Rotation2D.h
inst/include/Eigen/src/Geometry/arch/Geometry_SIMD.h
inst/include/Eigen/src/PardisoSupport/PardisoSupport.h
inst/include/Eigen/src/MetisSupport/MetisSupport.h
inst/include/Eigen/src/QR/CompleteOrthogonalDecomposition.h
inst/include/Eigen/src/QR/ColPivHouseholderQR.h
inst/include/Eigen/src/QR/HouseholderQR.h
inst/include/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h
inst/include/Eigen/src/QR/FullPivHouseholderQR.h
inst/include/Eigen/src/QR/HouseholderQR_LAPACKE.h
inst/include/Eigen/src/plugins/ArrayCwiseBinaryOps.h
inst/include/Eigen/src/plugins/MatrixCwiseBinaryOps.h
inst/include/Eigen/src/plugins/MatrixCwiseUnaryOps.h
inst/include/Eigen/src/plugins/CommonCwiseUnaryOps.h
inst/include/Eigen/src/plugins/BlockMethods.h
inst/include/Eigen/src/plugins/ReshapedMethods.h
inst/include/Eigen/src/plugins/CommonCwiseBinaryOps.h
inst/include/Eigen/src/plugins/IndexedViewMethods.h
inst/include/Eigen/src/plugins/ArrayCwiseUnaryOps.h
inst/include/Eigen/src/SparseQR/SparseQR.h
inst/include/Eigen/src/Cholesky/LLT.h
inst/include/Eigen/src/Cholesky/LDLT.h
inst/include/Eigen/src/Cholesky/LLT_LAPACKE.h
inst/include/Eigen/src/KLUSupport/KLUSupport.h
inst/include/Eigen/src/Core/PlainObjectBase.h
inst/include/Eigen/src/Core/Random.h
inst/include/Eigen/src/Core/Diagonal.h
inst/include/Eigen/src/Core/ForceAlignedAccess.h
inst/include/Eigen/src/Core/PermutationMatrix.h
inst/include/Eigen/src/Core/Transpose.h
inst/include/Eigen/src/Core/CommaInitializer.h
inst/include/Eigen/src/Core/IO.h
inst/include/Eigen/src/Core/CwiseBinaryOp.h
inst/include/Eigen/src/Core/CoreEvaluators.h
inst/include/Eigen/src/Core/Solve.h
inst/include/Eigen/src/Core/Reverse.h
inst/include/Eigen/src/Core/ArrayBase.h
inst/include/Eigen/src/Core/Stride.h
inst/include/Eigen/src/Core/CwiseTernaryOp.h
inst/include/Eigen/src/Core/SelfAdjointView.h
inst/include/Eigen/src/Core/Block.h
inst/include/Eigen/src/Core/CwiseNullaryOp.h
inst/include/Eigen/src/Core/DiagonalMatrix.h
inst/include/Eigen/src/Core/ArithmeticSequence.h
inst/include/Eigen/src/Core/DenseBase.h
inst/include/Eigen/src/Core/MapBase.h
inst/include/Eigen/src/Core/ConditionEstimator.h
inst/include/Eigen/src/Core/Fuzzy.h
inst/include/Eigen/src/Core/MathFunctions.h
inst/include/Eigen/src/Core/BooleanRedux.h
inst/include/Eigen/src/Core/NumTraits.h
inst/include/Eigen/src/Core/IndexedView.h
inst/include/Eigen/src/Core/ArrayWrapper.h
inst/include/Eigen/src/Core/Ref.h
inst/include/Eigen/src/Core/TriangularMatrix.h
inst/include/Eigen/src/Core/Product.h
inst/include/Eigen/src/Core/Assign_MKL.h
inst/include/Eigen/src/Core/NestByValue.h
inst/include/Eigen/src/Core/DenseStorage.h
inst/include/Eigen/src/Core/ProductEvaluators.h
inst/include/Eigen/src/Core/VectorwiseOp.h
inst/include/Eigen/src/Core/GlobalFunctions.h
inst/include/Eigen/src/Core/CwiseUnaryView.h
inst/include/Eigen/src/Core/CoreIterators.h
inst/include/Eigen/src/Core/Replicate.h
inst/include/Eigen/src/Core/VectorBlock.h
inst/include/Eigen/src/Core/AssignEvaluator.h
inst/include/Eigen/src/Core/BandMatrix.h
inst/include/Eigen/src/Core/Reshaped.h
inst/include/Eigen/src/Core/DenseCoeffsBase.h
inst/include/Eigen/src/Core/PartialReduxEvaluator.h
inst/include/Eigen/src/Core/SolverBase.h
inst/include/Eigen/src/Core/Select.h
inst/include/Eigen/src/Core/GeneralProduct.h
inst/include/Eigen/src/Core/Dot.h
inst/include/Eigen/src/Core/DiagonalProduct.h
inst/include/Eigen/src/Core/SelfCwiseBinaryOp.h
inst/include/Eigen/src/Core/Matrix.h
inst/include/Eigen/src/Core/Array.h
inst/include/Eigen/src/Core/MathFunctionsImpl.h
inst/include/Eigen/src/Core/CwiseUnaryOp.h
inst/include/Eigen/src/Core/Transpositions.h
inst/include/Eigen/src/Core/GenericPacketMath.h
inst/include/Eigen/src/Core/StlIterators.h
inst/include/Eigen/src/Core/SolveTriangular.h
inst/include/Eigen/src/Core/Inverse.h
inst/include/Eigen/src/Core/Visitor.h
inst/include/Eigen/src/Core/Assign.h
inst/include/Eigen/src/Core/Redux.h
inst/include/Eigen/src/Core/Swap.h
inst/include/Eigen/src/Core/MatrixBase.h
inst/include/Eigen/src/Core/EigenBase.h
inst/include/Eigen/src/Core/StableNorm.h
inst/include/Eigen/src/Core/NoAlias.h
inst/include/Eigen/src/Core/Map.h
inst/include/Eigen/src/Core/ReturnByValue.h
inst/include/Eigen/src/Core/util/Memory.h
inst/include/Eigen/src/Core/util/SymbolicIndex.h
inst/include/Eigen/src/Core/util/IntegralConstant.h
inst/include/Eigen/src/Core/util/Constants.h
inst/include/Eigen/src/Core/util/ConfigureVectorization.h
inst/include/Eigen/src/Core/util/ForwardDeclarations.h
inst/include/Eigen/src/Core/util/BlasUtil.h
inst/include/Eigen/src/Core/util/Meta.h
inst/include/Eigen/src/Core/util/MKL_support.h
inst/include/Eigen/src/Core/util/StaticAssert.h
inst/include/Eigen/src/Core/util/Macros.h
inst/include/Eigen/src/Core/util/IndexedViewHelper.h
inst/include/Eigen/src/Core/util/DisableStupidWarnings.h
inst/include/Eigen/src/Core/util/NonMPL2.h
inst/include/Eigen/src/Core/util/ReenableStupidWarnings.h
inst/include/Eigen/src/Core/util/ReshapedHelper.h
inst/include/Eigen/src/Core/util/XprHelper.h
inst/include/Eigen/src/Core/functors/NullaryFunctors.h
inst/include/Eigen/src/Core/functors/StlFunctors.h
inst/include/Eigen/src/Core/functors/BinaryFunctors.h
inst/include/Eigen/src/Core/functors/TernaryFunctors.h
inst/include/Eigen/src/Core/functors/UnaryFunctors.h
inst/include/Eigen/src/Core/functors/AssignmentFunctors.h
inst/include/Eigen/src/Core/arch/MSA/Complex.h
inst/include/Eigen/src/Core/arch/MSA/MathFunctions.h
inst/include/Eigen/src/Core/arch/MSA/PacketMath.h
inst/include/Eigen/src/Core/arch/SVE/MathFunctions.h
inst/include/Eigen/src/Core/arch/SVE/PacketMath.h
inst/include/Eigen/src/Core/arch/SVE/TypeCasting.h
inst/include/Eigen/src/Core/arch/ZVector/Complex.h
inst/include/Eigen/src/Core/arch/ZVector/MathFunctions.h
inst/include/Eigen/src/Core/arch/ZVector/PacketMath.h
inst/include/Eigen/src/Core/arch/AVX/Complex.h
inst/include/Eigen/src/Core/arch/AVX/MathFunctions.h
inst/include/Eigen/src/Core/arch/AVX/PacketMath.h
inst/include/Eigen/src/Core/arch/AVX/TypeCasting.h
inst/include/Eigen/src/Core/arch/AltiVec/Complex.h
inst/include/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
inst/include/Eigen/src/Core/arch/AltiVec/MathFunctions.h
inst/include/Eigen/src/Core/arch/AltiVec/PacketMath.h
inst/include/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
inst/include/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
inst/include/Eigen/src/Core/arch/GPU/MathFunctions.h
inst/include/Eigen/src/Core/arch/GPU/PacketMath.h
inst/include/Eigen/src/Core/arch/GPU/TypeCasting.h
inst/include/Eigen/src/Core/arch/HIP/hcc/math_constants.h
inst/include/Eigen/src/Core/arch/AVX512/Complex.h
inst/include/Eigen/src/Core/arch/AVX512/MathFunctions.h
inst/include/Eigen/src/Core/arch/AVX512/PacketMath.h
inst/include/Eigen/src/Core/arch/AVX512/TypeCasting.h
inst/include/Eigen/src/Core/arch/SSE/Complex.h
inst/include/Eigen/src/Core/arch/SSE/MathFunctions.h
inst/include/Eigen/src/Core/arch/SSE/PacketMath.h
inst/include/Eigen/src/Core/arch/SSE/TypeCasting.h
inst/include/Eigen/src/Core/arch/CUDA/Complex.h
inst/include/Eigen/src/Core/arch/SYCL/InteropHeaders.h
inst/include/Eigen/src/Core/arch/SYCL/MathFunctions.h
inst/include/Eigen/src/Core/arch/SYCL/PacketMath.h
inst/include/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
inst/include/Eigen/src/Core/arch/SYCL/TypeCasting.h
inst/include/Eigen/src/Core/arch/NEON/Complex.h
inst/include/Eigen/src/Core/arch/NEON/MathFunctions.h
inst/include/Eigen/src/Core/arch/NEON/PacketMath.h
inst/include/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
inst/include/Eigen/src/Core/arch/NEON/TypeCasting.h
inst/include/Eigen/src/Core/arch/Default/ConjHelper.h
inst/include/Eigen/src/Core/arch/Default/Half.h
inst/include/Eigen/src/Core/arch/Default/BFloat16.h
inst/include/Eigen/src/Core/arch/Default/TypeCasting.h
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tests/testthat/AD_knownFailures.R
tests/testthat/dynamicIndexingTestLists.R
tests/testthat/test-ADmatMult.R
tests/testthat/test-getDistributionInfo.R
tests/testthat/test-options.R
tests/testthat/test-ADchol.R
tests/testthat/userTestLog.Rout
tests/testthat/test-dynamicIndexing.R
tests/testthat/test-math.R
tests/testthat/test-ADoptim.R
tests/testthat/test-ADmodels-bigmv.R
tests/testthat/test-ADmatInverse.R
tests/testthat/test_utils.R
tests/testthat/test-parameterTransform.R
tests/testthat/test-mcem.R
tests/testthat/dynamicIndexingTestLog_Correct.Rout
tests/testthat/test-ADaghq.R
tests/testthat/test-noncenteredSampler.R
tests/testthat/bnp_monteCarloTest.Rmd
tests/testthat/dynamicIndexingTestLog.Rout
tests/testthat/distributionsTestLog_Correct.Rout
tests/testthat/sizeTestLog.Rout
tests/testthat/test-benchmark-building-steps.R
tests/testthat/test-declare.R
tests/testthat/test-externalCalls.R
tests/testthat/test-checkDSL.R
tests/testthat/test-getParam.R
tests/testthat/test-getDependencies.R
tests/testthat/test-nimbleFunctionInterfaces.R
tests/testthat/test-nimbleList_RCfun.R
tests/testthat/test-ADforwardSolve.R
tests/testthat/test-ADdists.R
tests/testthat/mcemTestLog.Rout
tests/testthat/AD_distribution_test_lists.R
tests/testthat/test-initializeModel.R
tests/testthat/test-noSMC.R
tests/testthat/test-ADmodels.R
man/setAndCalculate.Rd
man/setupOutputs.Rd
man/nimOptim.Rd
man/readBUGSmodel.Rd
man/registerDistributions.Rd
man/Exponential.Rd
man/model_macro_builder.Rd
man/nimMatrix.Rd
man/StickBreakingFunction.Rd
man/nimble-internal.Rd
man/flat.Rd
man/as.carAdjacency.Rd
man/nimStop.Rd
man/compileNimble.Rd
man/nfMethod.Rd
man/nfVar.Rd
man/nimOptimDefaultControl.Rd
man/buildIteratedFilter2.Rd
man/nimble-R-functions.Rd
man/is.nf.Rd
man/printErrors.Rd
man/initializeModel.Rd
man/waicNimbleList.Rd
man/Interval.Rd
man/RmodelBaseClass-class.Rd
man/values.Rd
man/nimble-package.Rd
man/buildAGHQGrid.Rd
man/decide.Rd
man/modelValues.Rd
man/ADproxyModelClass-class.Rd
man/nimDerivs.Rd
man/makeModelDerivsInfo.Rd
man/declare.Rd
man/laplace.Rd
man/Multivariate-t.Rd
man/buildAuxiliaryFilter.Rd
man/nimPrint.Rd
man/CnimbleFunctionBase-class.Rd
man/getsize.Rd
man/summaryLaplace.Rd
man/nimbleFunctionList-class.Rd
man/waic.Rd
man/nimbleRcall.Rd
man/optimResultNimbleList.Rd
man/optimDefaultControl.Rd
man/singleVarAccessClass-class.Rd
man/nodeFunctions.Rd
man/calculateWAIC.Rd
man/carMaxBound.Rd
man/eigenNimbleList.Rd
man/carBounds.Rd
man/getDefinition.Rd
man/autoBlock.Rd
man/Wishart.Rd
man/Dirichlet.Rd
man/t.Rd
man/modelValuesBaseClass-class.Rd
man/carMinBound.Rd
man/Inverse-Wishart.Rd
man/svdNimbleList.Rd
man/Constraint.Rd
man/clearCompiled.Rd
man/modelValuesConf.Rd
man/nimNumeric.Rd
man/nimSvd.Rd
man/nimbleFunctionVirtual.Rd
man/nimbleMCMC.Rd
man/nimOptimMethod.Rd
man/MCMCconf-class.Rd
man/nimbleType-class.Rd
man/as.carCM.Rd
man/any_na.Rd
man/makeParamInfo.Rd
man/nimEigen.Rd
man/getMacroParameters.Rd
man/nimCopy.Rd
man/Multinomial.Rd
man/distributionInfo.Rd
man/nimbleFunctionBase-class.Rd
man/configureMCMC.Rd
man/resize.Rd
man/getBUGSexampleDir.Rd
man/Inverse-Gamma.Rd
man/modelDefClass-class.Rd
man/nimbleModel.Rd
man/ADNimbleList.Rd
man/is.nl.Rd
man/deregisterDistributions.Rd
man/runLaplace.Rd
man/CmodelBaseClass-class.Rd
man/checkInterrupt.Rd
man/getNimbleOption.Rd
man/modelBaseClass-class.Rd
man/getConditionallyIndependentSets.Rd
man/simNodesMV.Rd
man/run.time.Rd
man/MultivariateNormal.Rd
man/getParam.Rd
man/asRow.Rd
man/nimCat.Rd
man/nimbleList.Rd
man/identityMatrix.Rd
man/buildEnsembleKF.Rd
man/withNimbleOptions.Rd
man/nimbleOptions.Rd
man/decideAndJump.Rd
man/buildLiuWestFilter.Rd
man/Rmatrix2mvOneVar.Rd
man/ChineseRestaurantProcess.Rd
man/nimble-math.Rd
man/configureRJ.Rd
man/pow_int.Rd
man/Categorical.Rd
man/makeBoundInfo.Rd
man/buildMCMC.Rd
man/codeBlockClass-class.Rd
man/valueInCompiledNimbleFunction.Rd
man/getSamplesDPmeasure.Rd
man/runCrossValidate.Rd
man/waicDetailsNimbleList.Rd
man/CAR-Normal.Rd
man/rankSample.Rd
man/nimbleExternalCall.Rd
man/setupMargNodes.Rd
man/CAR-Proper.Rd
man/getBound.Rd
man/optimControlNimbleList.Rd
man/BUGSdeclClass-class.Rd
man/extractControlElement.Rd
man/runMCMC.Rd
man/buildBootstrapFilter.Rd
man/nimbleCode.Rd
man/CAR_calcNumIslands.Rd
man/buildMCEM.Rd
man/parameterTransform.Rd
man/setSize.Rd
man/Double-Exponential.Rd
man/setAndCalculateOne.Rd
man/testBUGSmodel.Rd
man/nimIntegrate.Rd
man/nimDim.Rd
man/LKJ.Rd
man/simNodes.Rd
man/samplers.Rd
man/ADbreak.Rd
man/modelInitialization.Rd
man/nimbleFunction.Rd
