API for r4ss
R Code for Stock Synthesis

Global functions
DoProjectPlots	Man page Source code
NegLogInt_Fn	Man page Source code
PinerPlot	Man page Source code
SSMethod.Cond.TA1.8	Man page Source code
SSMethod.TA1.8	Man page Source code
SS_ForeCatch	Man page Source code
SS_RunJitter	Man page Source code
SS_Sensi_plot	Man page Source code
SS_changepars	Man page Source code
SS_decision_table_stuff	Man page Source code
SS_doRetro	Man page Source code
SS_fitbiasramp	Man page Source code
SS_html	Man page Source code
SS_makeHTMLdiagnostictable	Man page Source code
SS_output	Man page Source code
SS_parlines	Man page Source code
SS_plots	Man page Source code
SS_profile	Man page Source code
SS_read	Man page Source code
SS_read_summary	Man page Source code
SS_readctl	Man page Source code
SS_readctl_3.24	Man page Source code
SS_readctl_3.30	Man page Source code
SS_readdat	Man page Source code
SS_readdat_2.00	Man page Source code
SS_readdat_3.00	Man page Source code
SS_readdat_3.24	Man page Source code
SS_readdat_3.30	Man page Source code
SS_readforecast	Man page Source code
SS_readpar_3.24	Man page Source code
SS_readpar_3.30	Man page Source code
SS_readstarter	Man page Source code
SS_readwtatage	Man page Source code
SS_recdevs	Man page Source code
SS_splitdat	Man page Source code
SS_tune_comps	Man page Source code
SS_varadjust	Man page Source code
SS_write	Man page Source code
SS_writectl	Man page Source code
SS_writectl_3.24	Man page Source code
SS_writectl_3.30	Man page Source code
SS_writedat	Man page Source code
SS_writedat_3.24	Man page Source code
SS_writedat_3.30	Man page Source code
SS_writeforecast	Man page Source code
SS_writepar_3.24	Man page Source code
SS_writepar_3.30	Man page Source code
SS_writestarter	Man page Source code
SS_writewtatage	Man page Source code
SSbiologytables	Man page Source code
SSbootstrap	Man page Source code
SSdiagsTime2Year	Man page Source code
SSexecutivesummary	Man page Source code
SSgetMCMC	Man page Source code
SSgetoutput	Man page Source code
SSmakeMmatrix	Man page Source code
SSmohnsrho	Man page Source code
SSplotAgeMatrix	Man page Source code
SSplotBiology	Man page Source code
SSplotCatch	Man page Source code
SSplotCohortCatch	Man page Source code
SSplotComparisons	Man page Source code
SSplotComps	Man page Source code
SSplotData	Man page Source code
SSplotDiscard	Man page Source code
SSplotDynamicB0	Man page Source code
SSplotIndices	Man page Source code
SSplotMCMC_ExtraSelex	Man page Source code
SSplotMnwt	Man page Source code
SSplotMovementMap	Man page Source code
SSplotMovementRates	Man page Source code
SSplotNumbers	Man page Source code
SSplotPars	Man page Source code
SSplotProfile	Man page Source code
SSplotRecdevs	Man page Source code
SSplotRecdist	Man page Source code
SSplotRetroDevs	Source code
SSplotRetroRecruits	Man page Source code
SSplotSPR	Man page Source code
SSplotSelex	Man page Source code
SSplotSexRatio	Man page Source code
SSplotSpawnrecruit	Man page Source code
SSplotSummaryF	Man page Source code
SSplotTags	Man page Source code
SSplotTimeseries	Man page Source code
SSplotYield	Man page Source code
SSsummarize	Man page Source code
SStableComparisons	Man page Source code
SSunavailableSpawningOutput	Man page Source code
TSCplot	Man page Source code
add_legend	Man page Source code
bubble3	Man page Source code
check_inputlist	Man page Source code
check_model	Man page Source code
copy_SS_inputs	Man page Source code
file_increment	Man page Source code
getADMBHessian	Man page Source code
get_SIS_info	Man page Source code
get_comments	Man page Source code
get_dat_new_name	Man page Source code
get_last_phase	Man page Source code
get_ncol	Source code
get_tuning_table	Man page Source code
get_tv_parlabs	Man page Source code
is.wholenumber	Man page Source code
make_multifig	Man page Source code
make_multifig_sexratio	Man page Source code
mcmc.nuisance	Man page Source code
mcmc.out	Man page Source code
mountains	Man page Source code
plotCI	Man page Source code
populate_multiple_folders	Man page Source code
r4ss	Man page
r4ss-package	Man page
r4ss_logo	Man page Source code
read.admbFit	Man page Source code
rich.colors.short	Man page Source code
run_SS_models	Man page Source code
save_png	Man page Source code
selShapes	Man page Source code
sspar	Man page Source code
stackpoly	Man page Source code
translate_3.30_to_3.24_Q_setup	Man page Source code
translate_3.30_to_3.24_var_adjust	Man page Source code
write_fwf4	Man page Source code