Files in teal.modules.clinical

'teal' Modules for Standard Clinical Outputs

NEWS.md README.md R/facet_grid_formula.R R/tm_g_ipp.R R/tm_t_pp_basic_info.R R/tm_t_mult_events.R R/tm_t_abnormality_by_worst_grade.R R/tm_g_pp_vitals.R R/tm_t_events_by_grade.R R/tm_t_coxreg.R R/tm_t_events_patyear.R R/tm_g_pp_therapy.R R/tm_t_pp_medical_history.R R/arm_ref_comp.R R/data.R R/tm_t_shift_by_arm_by_worst.R R/tm_t_logistic.R R/tm_t_summary_by.R R/tm_t_abnormality.R R/tm_t_pp_prior_medication.R R/tm_t_events.R R/tm_t_shift_by_grade.R R/argument_convention.R R/substitute_names.R R/tm_a_mmrm.R R/teal.modules.clinical.R R/tm_t_tte.R R/string_ops.R R/tm_g_forest_rsp.R R/tm_t_ancova.R R/tm_a_gee.R R/tm_t_exposure.R R/tm_t_pp_laboratory.R R/tm_t_binary_outcome.R R/tm_t_summary.R R/tm_g_pp_adverse_events.R R/validate_standard_inputs.R R/tm_g_km.R R/tm_t_shift_by_arm.R R/zzz.R R/tm_g_ci.R R/tm_g_forest_tte.R R/tm_g_pp_patient_timeline.R R/tm_g_lineplot.R R/tm_g_barchart_simple.R R/tm_t_smq.R R/utils.R R/tm_t_events_summary.R R/labels.R inst/doc/quickstart_substitute.Rmd inst/doc/teal-modules-clinical.R inst/doc/teal-modules-clinical.Rmd inst/doc/quickstart_substitute.R inst/doc/generate_tmc_test_data.Rmd inst/doc/decorate-module-output.R inst/doc/generate_tmc_test_data.R inst/doc/decorate-module-output.Rmd tests/testthat.R tests/testthat/test-shinytest2-tm_t_events.R tests/testthat/test-shinytest2-tm_g_pp_therapy.R tests/testthat/test-tm_t_shift_by_arm.R tests/testthat/test-shinytest2-tm_t_pp_medical_history.R tests/testthat/setup-logger.R tests/testthat/test-shinytest2-tm_t_events_summary.R tests/testthat/test-tm_g_km.R tests/testthat/test-shinytest2-tm_t_coxreg.R tests/testthat/test-shinytest2-tm_t_shift_by_arm.R tests/testthat/test-tm_t_events_by_grade.R tests/testthat/test-shinytest2-tm_t_pp_basic_info.R tests/testthat/test-utils.R tests/testthat/test-shinytest2-tm_t_shift_by_grade.R tests/testthat/test-shinytest2-tm_t_summary.R tests/testthat/test-tm_t_smq.R tests/testthat/helper-TealAppDriver.R tests/testthat/test-shinytest2-tm_t_events_by_grade.R tests/testthat/test-shinytest2-tm_g_pp_adverse_events.R tests/testthat/test-tm_t_events.R tests/testthat/test-tm_g_ci.R tests/testthat/test-shinytest2-tm_g_forest_tte.R tests/testthat/test-shinytest2-tm_t_mult_events.R tests/testthat/test-shinytest2-tm_t_ancova.R tests/testthat/test-tm_t_binary_outcome.R tests/testthat/test-shinytest2-tm_t_events_patyear.R tests/testthat/test-tm_t_pp_medical_history.R tests/testthat/test-tm_t_shift_by_arm_by_worst.R tests/testthat/test-shinytest2-tm_g_pp_patient_timeline.R tests/testthat/helper-testing-depth.R tests/testthat/test-shinytest2-tm_t_pp_laboratory.R tests/testthat/test-tm_g_lineplot.R tests/testthat/test-tm_t_coxreg.R tests/testthat/test-substitute_names.R tests/testthat/test-tm_t_abnormality_by_worst_grade.R tests/testthat/test-shinytest2-tm_t_smq.R tests/testthat/test-tm_a_gee.R tests/testthat/test-tm_g_forest_tte.R tests/testthat/test-shinytest2-tm_g_lineplot.R tests/testthat/test-shinytest2-tm_a_mmrm.R tests/testthat/test-shinytest2-tm_t_tte.R tests/testthat/test-shinytest2-tm_a_gee.R tests/testthat/test-tm_t_exposure.R tests/testthat/test-tm_t_events_summary.R tests/testthat/test-shinytest2-tm_t_pp_prior_medication.R tests/testthat/test-shinytest2-tm_g_ipp.R tests/testthat/test-tm_t_ancova.R tests/testthat/test-shinytest2-tm_g_barchart_simple.R tests/testthat/test-tm_t_mult_events.R tests/testthat/test-shinytest2-tm_t_binary_outcome.R tests/testthat/test-tm_g_forest_rsp.R tests/testthat/test-shinytest2-tm_g_forest_rsp.R tests/testthat/test-shinytest2-tm_g_ci.R tests/testthat/test-shinytest2-tm_t_logistic.R tests/testthat/test-shinytest2-tm_t_abnormality.R tests/testthat/setup-options.R tests/testthat/test-tm_t_events_patyear.R tests/testthat/test-shinytest2-tm_t_summary_by.R tests/testthat/test-tm_t_logisitic.R tests/testthat/test-shinytest2-tm_t_exposure.R tests/testthat/test-shinytest2-tm_g_pp_vitals.R tests/testthat/test-validate_standard_inputs.R tests/testthat/test-tm_t_abnormality.R tests/testthat/test-tm_g_ipp.R tests/testthat/test-tm_t_tte.R tests/testthat/test-shinytest2-tm_g_km.R tests/testthat/test-tm_t_summary.R tests/testthat/test-facet_grid_formula.R tests/testthat/test-tm_t_summary_by.R tests/testthat/test-shinytest2-tm_t_abnormality_by_worst_grade.R tests/testthat/test-tm_a_mmrm.R tests/testthat/test-examples.R tests/testthat/test-shinytest2-tm_t_shift_by_arm_by_worst.R tests/testthat/test-string_ops.R tests/testthat/test-tm_t_shift_by_grade.R tests/testthat/_snaps/tm_g_ipp.md tests/testthat/_snaps/tm_t_coxreg.md tests/testthat/_snaps/tm_t_exposure.md tests/testthat/_snaps/tm_a_mmrm.md tests/testthat/_snaps/tm_t_logisitic.md tests/testthat/_snaps/tm_g_km.md tests/testthat/_snaps/tm_t_abnormality_by_worst_grade.md tests/testthat/_snaps/tm_t_summary_by.md tests/testthat/_snaps/tm_g_forest_tte.md tests/testthat/_snaps/tm_t_shift_by_grade.md tests/testthat/_snaps/tm_g_ci.md tests/testthat/_snaps/tm_t_tte.md tests/testthat/_snaps/tm_t_events.md tests/testthat/_snaps/tm_g_lineplot.md tests/testthat/_snaps/tm_t_binary_outcome.md tests/testthat/_snaps/utils.md tests/testthat/_snaps/tm_a_gee.md tests/testthat/_snaps/tm_t_smq.md tests/testthat/_snaps/tm_t_abnormality.md tests/testthat/_snaps/tm_t_mult_events.md tests/testthat/_snaps/tm_g_forest_rsp.md tests/testthat/_snaps/tm_t_events_by_grade.md tests/testthat/_snaps/tm_t_events_summary.md tests/testthat/_snaps/tm_t_shift_by_arm_by_worst.md tests/testthat/_snaps/tm_t_events_patyear.md tests/testthat/_snaps/tm_t_shift_by_arm.md tests/testthat/_snaps/tm_t_summary.md tests/testthat/_snaps/tm_t_pp_medical_history.md tests/testthat/_snaps/tm_t_ancova.md vignettes/quickstart_substitute.Rmd vignettes/teal-modules-clinical.Rmd vignettes/generate_tmc_test_data.Rmd vignettes/decorate-module-output.Rmd man/add_expr.Rd man/tm_t_shift_by_arm_by_worst.Rd man/tm_t_smq.Rd man/tm_t_coxreg.Rd man/template_mult_events.Rd man/tm_t_mult_events.Rd man/tm_g_pp_patient_timeline.Rd man/template_binary_outcome.Rd man/template_therapy.Rd man/get_var_labels.Rd man/tm_t_pp_basic_info.Rd man/tm_g_ci.Rd man/column_annotation_label.Rd man/split_col_expr.Rd man/tm_t_shift_by_arm.Rd man/template_shift_by_grade.Rd man/template_events_summary.Rd man/template_tte.Rd man/cs_to_select_spec.Rd man/check_arm_ref_comp.Rd man/get_paramcd_label.Rd man/tm_a_gee.Rd man/template_prior_medication.Rd man/tm_t_summary_by.Rd man/color_lab_values.Rd man/template_a_gee.Rd man/tm_t_pp_laboratory.Rd man/template_basic_info.Rd man/tm_t_ancova.Rd man/tm_t_events_summary.Rd man/template_coxreg_m.Rd man/tm_t_summary.Rd man/teal.modules.clinical-package.Rd man/template_summary.Rd man/cs_to_filter_spec.Rd man/tm_g_forest_tte.Rd man/make_barchart_simple_call.Rd man/module_arguments.Rd man/control_tte.Rd man/srv_decorate_teal_data.Rd man/template_medical_history.Rd man/call_concatenate.Rd man/template_shift_by_arm.Rd man/get_g_forest_obj_var_name.Rd man/template_forest_tte.Rd man/template_forest_rsp.Rd man/template_laboratory.Rd man/template_fit_mmrm.Rd man/template_patient_timeline.Rd man/template_adverse_events.Rd man/tm_g_lineplot.Rd man/tm_t_shift_by_grade.Rd man/bracket_expr.Rd man/template_logistic.Rd man/cs_to_des_select.Rd man/tm_t_exposure.Rd man/tm_t_abnormality.Rd man/validate_arm.Rd man/arm_ref_comp_observer.Rd man/template_vitals.Rd man/template_g_ci.Rd man/tm_a_mmrm.Rd man/tm_g_ipp.Rd man/substitute_names.Rd man/prepare_arm_levels.Rd man/tm_t_events_patyear.Rd man/template_smq.Rd man/prepare_arm.Rd man/tm_g_forest_rsp.Rd man/template_events_by_grade.Rd man/template_exposure.Rd man/template_events_col_by_grade.Rd man/tm_t_pp_prior_medication.Rd man/as_num.Rd man/tm_t_events.Rd man/substitute_q.Rd man/template_coxreg_u.Rd man/extract_input.Rd man/tm_g_km.Rd man/template_g_lineplot.Rd man/tm_t_events_by_grade.Rd man/template_arguments.Rd man/pipe_expr.Rd man/tm_g_barchart_simple.Rd man/default_total_label.Rd man/tm_g_pp_vitals.Rd man/cs_to_des_filter.Rd man/template_abnormality.Rd man/tm_g_pp_adverse_events.Rd man/split_choices.Rd man/tm_g_pp_therapy.Rd man/template_events.Rd man/tm_t_binary_outcome.Rd man/tm_t_pp_medical_history.Rd man/template_events_patyear.Rd man/template_abnormality_by_worst_grade.Rd man/clean_description.Rd man/template_ancova.Rd man/facet_grid_formula.Rd man/h_concat_expr.Rd man/tm_t_tte.Rd man/template_g_km.Rd man/tm_t_abnormality_by_worst_grade.Rd man/template_shift_by_arm_by_worst.Rd man/select_decorators.Rd man/template_g_ipp.Rd man/split_interactions.Rd man/is.cs_or_des.Rd man/validate_standard_inputs.Rd man/ex_data.Rd man/template_summary_by.Rd man/tm_t_logistic.Rd