Biocview "GUI"

A Better Way To Explore What Is Best

Add resources to ExperimentHub

A framework for sharing interactive data and plots from R through the web

A graphical interface designed to facilitate analysis of microarrays and miRNA/RNA-seq data on laptops

A Graphical User Interface for accessing and modeling the Cancer Genomics Data of MSKCC

A graphical user interface for MSstatsQC package

A graphical user interface to conduct a dose-response analysis of microarray data

Analysis of Large Affymetrix Microarray Data Sets

Analyze flow cytometer data to determine sample ploidy

An Interactive Consensus Clustering Framework for Multi-platform Data Analysis

annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions

An R package for quantitative integration and analysis of multiple omics assays from heterogeneous samples

A shiny GUI for MSGFplus

A shiny user interface for rTRM

A user friendly R package to perform the network enrichment analysis (NEA).

A web interface for gene-set enrichment analyses

Base package for enabling powerful shiny web displays of Bioconductor objects

Client to access AnnotationHub resources

Client to access ExperimentHub resources

Combines WGCNA and xCell readouts with bayesian network learrning to generate a Gene-Module Immune-Cell network (GMIC)

Comparative Evaluation and Visualization of Differential Expression Analyses

Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data

Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework

Cross Platform Meta-Analysis of Microarray Data

CUE: CpG impUtation Ensemble for DNA Methylation Levels Across the HumanMethylation450 (HM450) BeadChip and HumanMethylation EPIC (HM850) BeadChip Platforms

cytofkit2: an integrated mass cytometry data analysis pipeline. Cytofkit provides functions for data pre-processing, fast clustering, data visualization through linear or non-linear dimensionality reduction, automatic identification of cell subsets, and inference of the relatedness between cell subsets

cytofkit: an integrated mass cytometry data analysis pipeline

Data Package for the annoFuse Bioconductor Package

Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis

Epiviz Genome Browser panel for iSEEu

Fast treatment of MACSQuantify FACS data

FIREcaller: an R package for detecting frequently interacting regions from Hi-C data

For Visualizing Differential Expression Analysis

GEM: fast association study for the interplay of Gene, Environment and Methylation

Generate PanViz visualisations from your pangenome

GEOsearch

Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Graphical User Interface for High Performance BAM-based binary alternative splicing event quantitation, differential analysis, and visualisation

Graphical User Interface for IsoCorrectoR

GSCA: Gene Set Context Analysis

GUI for exploratory data analysis of systems biology data

GUI for limma Package with Affymetrix Microarrays

GUI for limma Package With Two Color Microarrays

Hi-C Annotation and Graphics Ensemble

Improving metabolome characterization using molecular formula databases

interactive analysis and visualization of alternative splicing in R

Interactive Differential Expression AnaLysis

Interactive Multi-Omics Cancers Data Visualization and Analysis

Interactive SummarizedExperiment Explorer

Interactive visualisation of spatial proteomics data

Interactive Visualization of RNA-seq Data Using a Principal Components Approach

Interactive visualization of scRNA-seq data with Cerebro

Interactive Workflow for Discovering Rhythmicity in Biological Data

iSEE Universe

iSMNN: Batch Effect Correction for Single-cell RNA-seq data via Iterative Supervised Mutual Nearest Neighbor Refinement

KMPPc: K-M Plot for Pan-cancer

Microbial Community Analysis GUI

Minimized Single-Cell Consensus Clustering

'(m,n)-mer' - A Simple Statistical Feature for Sequence Classification

One-Dimensional Soli-Expression by Nonlinear Stochastic Embedding (OneSENSE)

Package for enabling powerful shiny web displays of Bioconductor objects

PKG_TITLE

Processing of adductomic mass spectral datasets

Provides a GUI for DAPAR

Provides shiny modules to visualize sparrow results

R/Bioconductor package to interactively explore and visualize single cell RNA-seq datasets with hierarhical annotations

R Interface to epiviz web app

R interface to epiviz web components

R Interface to the metaviz web app for interactive metagenomics data analysis and visualization

Run Epiviz Interactive Genomic Data Visualization App within R

SAFE-clustering:Single-cell Aggregated (From Ensemble) Clustering for Single-cell RNA-seq Data

SAME: Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble for Single-cell RNA-seq Data

sangeranalyseR: a suite of functions for the analysis of Sanger sequence data in R

scanMiR shiny application

SEPA

Shiny app GUI wrapper for ggplot with built-in statistical analysis

Shiny application for interacting with GA4GH-based data servers

Shiny Application for Interactive CRISPR Screen Visualization, Exploration, Comparison, and Filtering

Shiny-based interactive data-quality exploration for omics data

Shiny interface for Cardinal

Single-Cell Consensus Clustering

Single Cell Shiny Application for Analysing Single Cell Transcriptomics Data

SMNN: Batch Effect Correction for Single-cell RNA-seq data with Supervised Mutual Nearest Neighbor Detection

SPADE -- An analysis and visualization tool for Flow Cytometry

Statistical Analysis of Molecular Profiles

System-wise protein turnover curve fitting

"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data"

Tools for Single-Cell Analysis

Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells

Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells.

TSCAN: Tools for Single-Cell ANalysis

TVTB: The VCF Tool Box

uSORT: A self-refining ordering pipeline for gene selection

Visual and interactive gene expression analysis

Visual and interactive quality control of large Illumina DNA Methylation array data sets

Visual Exploration of Omic Datasets Using a Shiny App

Well Plate Maker

What the Package Does (One Line, Title Case)

Biocview "GUI"

R Package Documentation

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