aqp
Algorithms for Quantitative Pedology

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aqp: Algorithms for Quantitative Pedology
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API

API for aqp
Algorithms for Quantitative Pedology

Global functions
$ Man page
$,SoilProfileCollection-method Man page
$<- Man page
$<-,SoilProfileCollection-method Man page
.Gmedian.chunk Source code
.NCSP_distanceCalc Source code
.SumDistanceList Source code
.aqp_color_map Source code
.as.data.frame.aqp Source code
.black_soil Source code
.checkNAdepths Source code
.closestMunselltoCIELAB Source code
.coalesce.idx Source code
.codify Source code
.codify_salt_severity Source code
.createSiteFromHorizon Source code
.data.frame.j Source code
.data_dots Source code
.depthAxisSeq Source code
.dice Source code
.drawDepthAxis Source code
.electricForce Source code
.enforce_df_class Source code
.estimateColorMixture Source code
.funDepthOf Source code
.genSlabLabels2 Source code
.get.ssc.low.rv.high Source code
.getMissingDataFraction Source code
.get_rf_ec_lut_RO2 Source code
.get_rf_lut_column Source code
.get_rf_lut_row Source code
.guess_df Source code
.hzMetadataNames Source code
.initSPCfromMF Source code
.insert_dropped_horizons Source code
.interpretHorizonColor Source code
.isColorValid Source code
.lpp Man page Source code
.make.segments Source code
.makeEquivalentMunsellLUT Source code
.matchCodeOrTerm Source code
.onAttach Source code
.onLoad Source code
.parseExtra Source code
.parseGrouped_formula Source code
.parseID Source code
.parseMunsellHue Source code
.phclass Source code
.phclasses1 Source code
.phrange Source code
.pigments.depths Source code
.pigments.pam Source code
.pigments.proportions Source code
.pii Source code
.pii_by_profile Source code
.profileApply Source code
.prototypeSPC Source code
.qSPC.char.1 Source code
.qSPC.char.2 Source code
.qSPC.list Source code
.raggedLines Source code
.rank_salts Source code
.reactionclass Source code
.reactionclass2 Source code
.require.metadata.aqp Source code
.rescaleRange Source code
.set.metadata.aqp Source code
.simulateColorFromDE00 Source code
.simulateColorFromProportions Source code
.slab Source code
.slab.fun.factor.default Source code
.slab.fun.factor.weighted Source code
.slab.fun.numeric.HD Source code
.slab.fun.numeric.default Source code
.slab.fun.numeric.fast Source code
.slab.fun.numeric.weighted Source code
.slab2SPC Source code
.spc_bbox Source code
.splitLegend Source code
.summarizeMunsellSpectraRanges Source code
.thickestHzID Source code
.transfer.metadata.aqp Source code
.updateSite Source code
.volume2df Source code
.wgm Source code
GHL Man page
GHL,SoilProfileCollection-method Man page
GHL<- Man page
GHL<-,SoilProfileCollection-method Man page
HzDepthLogicSubset Man page Source code
L1_profiles Man page Source code
NCSP Man page Source code
ROSETTA.centroids Man page
ReactionClassLevels Man page Source code
SANN_1D Man page Source code
SPC.with.overlap Man page
SoilProfileCollection Man page
SoilProfileCollection-class Man page
SoilTextureLevels Man page Source code
[,SoilProfileCollection-method Man page
[[ Man page
[[,SoilProfileCollection,ANY,ANY-method Man page
[[,SoilProfileCollection,ANY-method, Man page
[[<- Man page
[[<-,SoilProfileCollection,ANY,ANY-method Man page
accumulateDepths Man page Source code
addBracket Man page Source code
addDiagnosticBracket Man page Source code
addVolumeFraction Man page Source code
aggregateColor Man page Source code
aggregateSoilDepth Man page Source code
alignTransect Man page Source code
allocate Man page Source code
aqp Man page
aqp-package Man page
aqp.env Man page
aqp_df_class Man page
aqp_df_class,SoilProfileCollection-method Man page
aqp_df_class<- Man page
aqp_df_class<-,SoilProfileCollection-method Man page
argillic.clay.increase.depth Man page Source code
as Man page
as,SoilProfileCollection-method Man page
as.character,SoilProfileCollection-method Man page
as.data.frame,SoilProfileCollection-method Man page
barron.torrent.redness.LAB Man page Source code
bootstrapSoilTexture Man page Source code
brierScore Man page Source code
buntley.westin.index Man page Source code
c Man page
c,SoilProfileCollection-method Man page
ca630 Man page
checkHzDepthLogic Man page Source code
checkSPC Man page Source code
colorChart Man page Source code
colorContrast Man page Source code
colorContrastPlot Man page Source code
colorQuantiles Man page Source code
combine Man page
combine,SoilProfileCollection-method Man page
combine,list-method Man page
compareSites Man page Source code
compositeSPC Man page Source code
compositeSPC,SoilProfileCollection-method Man page
confusionIndex Man page Source code
contrastChart Man page Source code
contrastClass Man page Source code
coordinates Man page
coordinates,SoilProfileCollection-method Man page
coordinates<- Man page
coordinates<-,SoilProfileCollection,ANY-method Man page
coordinates<-,SoilProfileCollection,character-method Man page
correctAWC Man page Source code
crit.clay.argillic Man page Source code
denormalize Man page Source code
depthOf Man page Source code
depthWeights Man page Source code
depthWeights,SoilProfileCollection-method Man page
depth_units Man page
depth_units,SoilProfileCollection-method Man page
depth_units<- Man page
depth_units<-,SoilProfileCollection-method Man page
depths Man page
depths,SoilProfileCollection-method Man page
depths<- Man page
depths<-,SoilProfileCollection-method Man page
depths<-,data.frame-method Man page
diagnostic_hz Man page
diagnostic_hz,SoilProfileCollection-method Man page
diagnostic_hz<- Man page
diagnostic_hz<-,SoilProfileCollection-method Man page
dice Man page
dice,SoilProfileCollection-method Man page
dissolve_hz Man page
duplicate Man page Source code
electroStatics_1D Man page Source code
equivalentMunsellChips Man page Source code
equivalent_munsell Man page
estimateAWC Man page Source code
estimatePSCS Man page Source code
estimateSoilColor Man page Source code
estimateSoilDepth Man page Source code
evalGenHZ Man page Source code
evalMissingData Man page Source code
explainPlotSPC Man page Source code
fillHzGaps Man page Source code
findOverlap Man page Source code
fixOverlap Man page Source code
flagOverlappingHz Man page Source code
fragmentClasses Man page Source code
fragmentSieve Man page Source code
fragvol_to_texmod Man page
genSlabLabels Man page Source code
generalize.hz Man page Source code
generalizeHz Man page
generalizeHz,SoilProfileCollection-method Man page
generalizeHz,character-method Man page
genhzTableToAdjMat Man page Source code
get.increase.depths Man page Source code
get.increase.matrix Man page Source code
get.ml.hz Man page Source code
get.slice Man page Source code
getArgillicBounds Man page Source code
getCambicBounds Man page Source code
getClosestMunsellChip Man page Source code
getLastHorizonID Man page Source code
getMineralSoilSurfaceDepth Man page Source code
getPlowLayerDepth Man page Source code
getSoilDepthClass Man page Source code
getSpatial Man page
getSpatial,SoilProfileCollection-method Man page
getSurfaceHorizonDepth Man page Source code
glom Man page
glom,SoilProfileCollection-method Man page
glomApply Man page Source code
glomApply,SoilProfileCollection-method Man page
grepSPC Man page
grepSPC,SoilProfileCollection-method Man page
groupSPC Man page Source code
groupedProfilePlot Man page Source code
guessGenHzLevels Man page Source code
guessHzAttrName Man page Source code
guessHzDesgnName Man page Source code
guessHzTexClName Man page Source code
harden.melanization Man page Source code
harden.rubification Man page Source code
harmonize Man page
harmonize,SoilProfileCollection-method Man page
hasDarkColors Man page Source code
horizonColorIndices Man page Source code
horizonDepths Man page
horizonDepths,SoilProfileCollection-method Man page
horizonDepths<- Man page
horizonDepths<-,SoilProfileCollection-method Man page
horizonNames Man page
horizonNames,SoilProfileCollection-method Man page
horizonNames<- Man page
horizonNames<-,SoilProfileCollection-method Man page
horizons Man page
horizons,SoilProfileCollection-method Man page
horizons<- Man page
horizons<-,SoilProfileCollection-method Man page
huePosition Man page Source code
huePositionCircle Man page Source code
hurst.redness Man page Source code
hzAbove Man page Source code
hzBelow Man page Source code
hzDepthTests Man page Source code
hzDesgn Man page
hzDesgn,SoilProfileCollection-method Man page
hzDistinctnessCodeToOffset Man page Source code
hzID Man page
hzID,SoilProfileCollection-method Man page
hzID<- Man page
hzID<-,SoilProfileCollection-method Man page
hzMetadata Man page
hzMetadata,SoilProfileCollection-method Man page
hzOffset Man page Source code
hzTopographyCodeToLineType Man page Source code
hzTopographyCodeToOffset Man page Source code
hzTransitionProbabilities Man page Source code
hzdesgnname Man page
hzdesgnname,SoilProfileCollection-method Man page
hzdesgnname<- Man page
hzdesgnname<-,SoilProfileCollection-method Man page
hzidname Man page
hzidname,SoilProfileCollection-method Man page
hzidname<- Man page
hzidname<-,SoilProfileCollection-method Man page
hztexclname Man page
hztexclname,SoilProfileCollection-method Man page
hztexclname<- Man page
hztexclname<-,SoilProfileCollection-method Man page
idname Man page
idname,SoilProfileCollection-method Man page
initSpatial<- Man page
initSpatial<-,SoilProfileCollection,ANY,ANY-method Man page
initSpatial<-,SoilProfileCollection,ANY,character-method Man page
invertLabelColor Man page Source code
isEmpty Man page
isEmpty,SoilProfileCollection-method Man page
jacobs2000 Man page
length Man page
length,SoilProfileCollection-method Man page
lunique Man page Source code
max Man page
max,SoilProfileCollection-method Man page
maxDepthOf Man page Source code
metadata Man page
metadata,SoilProfileCollection-method Man page
metadata<- Man page
metadata<-,SoilProfileCollection-method Man page
min Man page
min,SoilProfileCollection-method Man page
minDepthOf Man page Source code
missingDataGrid Man page Source code
mixMunsell Man page Source code
mollic.thickness.requirement Man page Source code
mostLikelyHzSequence Man page Source code
munsell Man page
munsell.spectra Man page
munsell.spectra.wide Man page
munsell2rgb Man page Source code
munsell2spc Man page
munsell2spc,SoilProfileCollection-method Man page
munsellHuePosition Man page
mutate Man page
mutate,SoilProfileCollection-method Man page
mutate_profile Man page
mutate_profile,SoilProfileCollection-method Man page
names Man page
names,SoilProfileCollection-method Man page
nrow Man page
nrow,SoilProfileCollection-method Man page
osd Man page
overlapMetrics Man page Source code
panel.depth_function Man page Source code
parseMunsell Man page Source code
pbindlist Man page Source code
pc Man page Source code
pc.SPC Man page Source code
permute_profile Man page
perturb Man page Source code
ph_to_rxnclass Man page Source code
plot Man page
plot,SoilProfileCollection,ANY-method Man page
plot,SoilProfileCollection,ANY-method,plot.SoilProfileCollection Man page
plotColorMixture Man page Source code
plotColorQuantiles Man page Source code
plotMultipleSPC Man page Source code
plotSPC Man page Source code
plot_distance_graph Man page Source code
prepanel.depth_function Man page Source code
previewColors Man page Source code
prj Man page
prj,SoilProfileCollection-method Man page
prj<- Man page
prj<-,SoilProfileCollection-method Man page
profileApply Man page
profileApply,SoilProfileCollection-method Man page
profileGroupLabels Man page Source code
profileInformationIndex Man page Source code
profile_compare Man page
profile_compare,SoilProfileCollection-method Man page
profile_compare,data.frame-method Man page
profile_id Man page
profile_id,SoilProfileCollection-method Man page
profile_id<- Man page
profile_id<-,SoilProfileCollection-method Man page
proj4string,SoilProfileCollection-method Man page
proj4string<-,SoilProfileCollection,ANY-method Man page
quickSPC Man page Source code
random_profile Man page Source code
reactionclass Man page
rebuildSPC Man page Source code
reduceSPC Man page Source code
reorderHorizons Man page
reorderHorizons,SoilProfileCollection-method Man page
repairMissingHzDepths Man page Source code
replaceHorizons<- Man page
replaceHorizons<-,SoilProfileCollection-method Man page
restrictions Man page
restrictions,SoilProfileCollection-method Man page
restrictions<- Man page
restrictions<-,SoilProfileCollection-method Man page
rgb2munsell Man page Source code
rowley2019 Man page
rxnclass_to_ph Man page Source code
segment Man page Source code
shannonEntropy Man page Source code
show Man page
show,SoilProfileCollection-method Man page
sierraTransect Man page
sim Man page Source code
simulateColor Man page Source code
site Man page
site,SoilProfileCollection-method Man page
site<- Man page
site<-,SoilProfileCollection-method Man page
siteNames Man page
siteNames,SoilProfileCollection-method Man page
siteNames<- Man page
siteNames<-,SoilProfileCollection-method Man page
slab Man page
slab,SoilProfileCollection-method Man page
slab_function Man page
slice Man page
slice,SoilProfileCollection-method Man page
slice-methods Man page
slice.fast Man page Source code
slicedHSD Man page
soilColorSignature Man page Source code
soilPalette Man page Source code
soil_minerals Man page
soiltexture Man page
sp1 Man page
sp2 Man page
sp3 Man page
sp4 Man page
sp5 Man page
sp6 Man page
spc2mpspline Man page
spc2mpspline,SoilProfileCollection-method Man page
spc_in_sync Man page Source code
spec2Munsell Man page Source code
spectral.reference Man page
split,SoilProfileCollection-method Man page
splitLogicErrors Man page Source code
ssc_to_texcl Man page
subApply Man page
subApply,SoilProfileCollection-method Man page
subset Man page
subset,SoilProfileCollection-method Man page
subsetHz Man page
subsetHz,SoilProfileCollection-method Man page
subsetProfiles Man page
subsetProfiles,SoilProfileCollection-method Man page
summarize Man page
summarizeSPC Man page Source code
summarizeSPC,SoilProfileCollection-method, Man page
summaryTauW Man page Source code
tauW Man page Source code
texcl_to_ssc Man page Source code
texmod_to_fragvoltot Man page
textureTriangleSummary Man page Source code
texture_to_taxpartsize Man page
texture_to_texmod Man page
thompson.bell.darkness Man page Source code
traditionalColorNames Man page
transform,SoilProfileCollection-method Man page
trunc,SoilProfileCollection-method Man page
unique Man page
unique,SoilProfileCollection-method Man page
unroll Man page Source code
us.state.soils Man page
validSpatialData Man page
validSpatialData,SoilProfileCollection-method Man page
wilson2022 Man page
xtableTauW Man page Source code
aqp documentation built on Sept. 8, 2023, 5:45 p.m.

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