Files in aqp
Algorithms for Quantitative Pedology
.Rinstignore
MD5
NEWS.md
NAMESPACE
DESCRIPTION
R/addBracket.R
R/SoilProfileCollection-coercion.R
R/bootstrapSoilTexture.R
R/alignTransect.R
R/SoilProfileCollection-slice-methods.R
R/textureTriangleSummary.R
R/huePosition.R
R/slab.R
R/color-palettes.R
R/munsell2rgb.R
R/collapseHz.R
R/hzTransitionProbabilities.R
R/allocate.R
R/segment.R
R/invertLabelColor.R
R/datadots.R
R/SoilProfileCollection-integrity.R
R/unroll.R
R/mutate_profile.R
R/NCSP.R
R/getLastHorizonID.R
R/mostLikelyHzSequence.R
R/groupSPC.R
R/guessColumnNames.R
R/duplicate.R
R/accumulateDepths.R
R/estimatePSCS.R
R/repairMissingHzDepths.R
R/random_profile.R
R/getClosestMunsellChip.R
R/SoilProfileCollection-methods.R
R/plotMultipleSPC.R
R/reaction.R
R/combine.R
R/mixMunsell.R
R/harmonize.R
R/transform.R
R/compositeSPC.R
R/split.R
R/depthOf.R
R/splitLogicErrors.R
R/aqp-label-placement-solvers.R
R/colorContrastPlot.R
R/depthWeights.R
R/spec2Munsell.R
R/generalize.hz.R
R/plotColorMixture.R
R/previewColors.R
R/slab-utils.R
R/compareSites.R
R/getSoilDepthClass.R
R/SoilProfileCollection-metadata.R
R/soilColorIndices.R
R/glomApply.R
R/colorQuantiles.R
R/sketch-utils.R
R/col2Munsell.R
R/SoilProfileCollection-spatial.R
R/estimateSoilDepth.R
R/accuracy_uncertainty.R
R/estimateSoilColor.R
R/denormalize.R
R/evalMissingData.R
R/fillHzGaps.R
R/get.ml.hz.R
R/prepanel.depth_function.R
R/aqp-package.R
R/equivalentMunsellChips.R
R/fragmentClasses.R
R/soilPalette.R
R/colorContrast.R
R/enforce_df_class.R
R/profile_compare.R
R/SoilProfileCollection-iterators.R
R/groupedProfilePlot.R
R/flagOverlappingHz.R
R/lunique.R
R/glom.R
R/slab2SPC.R
R/HzDepthLogicSubset.R
R/mollicEpipedon.R
R/warpHorizons.R
R/panel.depth_function.R
R/getArgillicBounds.R
R/dice.R
R/factor-level-setters.R
R/profileInformationIndex.R
R/getSurfaceHorizonDepth.R
R/get.increase.matrix.R
R/aggregateColor.R
R/aggregateSoilDepth.R
R/colorChart.R
R/hzOffset.R
R/plotSPC.R
R/thicknessOf.R
R/slicedHSD.R
R/contrastClass.R
R/missingDataGrid.R
R/explainPlotSPC.R
R/fragmentSieve.R
R/zzz.R
R/AAAA.R
R/rebuildSPC.R
R/L1_profiles.R
R/perturb.R
R/addVolumeFraction.R
R/evalGenHz.R
R/checkHzDepthLogic.R
R/spc2mpspline.R
R/SoilProfileCollection-setters.R
R/Class-SoilProfileCollection.R
R/summarize.R
R/data-documentation.R
R/contrastChart.R
R/soilColorSignature.R
R/plot_distance_graph.R
R/getCambicBounds.R
R/quickSPC.R
R/parseMunsell.R
R/guessGenHzLevels.R
R/SoilProfileCollection-operators.R
R/checkSPC.R
R/texture.R
R/sim.R
R/reduce.R
R/estimateAWC.R
R/simulateColor.R
R/huePositionCircle.R
R/hzBoundary.R
R/tauW.R
inst/_pkgdown.yml
inst/CITATION
inst/WORDLIST
inst/doc/Introduction-to-SoilProfileCollection-Objects.html
inst/doc/new-in-aqp-2.Rmd
inst/doc/NCSP.R
inst/doc/Introduction-to-SoilProfileCollection-Objects.Rmd
inst/doc/aqp-overview.html
inst/doc/missing-data.Rmd
inst/doc/Munsell-color-conversion.R
inst/doc/Munsell-color-conversion.html
inst/doc/missing-data.R
inst/doc/aqp-overview.Rmd
inst/doc/missing-data.html
inst/doc/new-in-aqp-2.R
inst/doc/Introduction-to-SoilProfileCollection-Objects.R
inst/doc/label-placement.html
inst/doc/label-placement.R
inst/doc/Munsell-color-conversion.Rmd
inst/doc/new-in-aqp-2.html
inst/doc/NCSP.html
inst/doc/aqp-overview.R
inst/doc/NCSP.Rmd
inst/doc/label-placement.Rmd
inst/example-data/jacobs2000-hz-data.csv
inst/example-data/jacobs2000-site-data.csv
demo/slope_effect_hz_thickness.R
demo/00Index
demo/aqp.R
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-harmonize.R
tests/testthat/test-genhz.R
tests/testthat/test-segment.R
tests/testthat/test-equivalentMunsellChips.R
tests/testthat/test-guessColumnNames.R
tests/testthat/test-plotSPC.R
tests/testthat/test-mollic.R
tests/testthat/test-texture.R
tests/testthat/test-color-signature.R
tests/testthat/test-SoilProfileCollection-metadata.R
tests/testthat/test-alignTransect.R
tests/testthat/test-flagOverlappingHz.R
tests/testthat/test-hzBoundary.R
tests/testthat/test-NCSP.R
tests/testthat/test-missingDataGrid.R
tests/testthat/test-fix-find-overlap.R
tests/testthat/test-profileInformationIndex.R
tests/testthat/test-split.R
tests/testthat/test-textureTriangleSummary.R
tests/testthat/test-groupSPC.R
tests/testthat/test-argillic.R
tests/testthat/test-colorIndices.R
tests/testthat/test-spec2Munsell.R
tests/testthat/test-huePosition.R
tests/testthat/test-slabPlot.R
tests/testthat/test-estimateSoilColor.R
tests/testthat/test-SPC-objects.R
tests/testthat/test-profileApply.R
tests/testthat/test-mutate_profile.R
tests/testthat/test-duplicate.R
tests/testthat/test-invertLabelColor.R
tests/testthat/test-SPC-combine.R
tests/testthat/test-glom.R
tests/testthat/test-reduceSPC.R
tests/testthat/test-SPC-k-keywords.R
tests/testthat/test-SoilProfileCollection-setters.R
tests/testthat/test-evalMissingData.R
tests/testthat/test-color-conversion.R
tests/testthat/test-aggregateColor.R
tests/testthat/test-cambic.R
tests/testthat/test-aqp.R
tests/testthat/test-surface-thickness.R
tests/testthat/test-L1_profiles.R
tests/testthat/test-DT-tbl.R
tests/testthat/test-accumulateDepths.R
tests/testthat/test-estimateAWC.R
tests/testthat/test-checkHzDepthLogic.R
tests/testthat/test-getLastHorizonID.R
tests/testthat/Rplots.pdf
tests/testthat/test-mixMunsell.R
tests/testthat/test-fillHzGaps.R
tests/testthat/test-simulateColor.R
tests/testthat/test-repairMissingHzDepths.R
tests/testthat/test-collapseHz.R
tests/testthat/test-quickSPC.R
tests/testthat/test-dice.R
tests/testthat/test-soil-depth.R
tests/testthat/test-genSlabLabels.R
tests/testthat/test-estimatePSCS.R
tests/testthat/test-hzOffset.R
tests/testthat/test-colorContrast.R
tests/testthat/test-slab.R
tests/testthat/test-fragmentSieve.R
tests/testthat/test-spc2mpspline.R
tests/testthat/test-bootstrapSoilTexture.R
tests/testthat/test-perturb.R
tests/testthat/test-thicknessOf.R
tests/testthat/test-denormalize.R
tests/testthat/test-colorQuantiles.R
tests/testthat/test-estimateSoilDepth.R
tests/testthat/test-subsetHz.R
tests/testthat/test-lunique.R
tests/testthat/test-reaction.R
tests/testthat/test-aggregateSoilDepth.R
tests/testthat/test-acc-unc.R
tests/testthat/test-profile_compare.R
vignettes/new-in-aqp-2.Rmd
vignettes/Introduction-to-SoilProfileCollection-Objects.Rmd
vignettes/missing-data.Rmd
vignettes/aqp-overview.Rmd
vignettes/Munsell-color-conversion.Rmd
vignettes/NCSP.Rmd
vignettes/label-placement.Rmd
data/datalist
data/sp1.rda
data/ROSETTA.centroids.rda
data/sierraTransect.rda
data/SPC.with.overlap.rda
data/us.state.soils.rda
data/spectral.reference.rda
data/sp6.rda
data/soil_minerals.rda
data/munsell.rda
data/sp5.rda
data/jacobs2000.rda
data/sp4.rda
data/traditionalColorNames.rda
data/osd.rda
data/ca630.rda
data/soiltexture.rda
data/reactionclass.rda
data/wilson2022.rda
data/sp2.rda
data/munsell.spectra.rda
data/munsell.spectra.wide.rda
data/sp3.rda
data/equivalent_munsell.rda
data/munsellHuePosition.rda
data/rowley2019.rda
man/hzmetaname.Rd
man/fixOverlap.Rd
man/sp4.Rd
man/hzTransitionProbabilities.Rd
man/horizons.Rd
man/profile_id.Rd
man/thicknessOf.Rd
man/soilColorSignature.Rd
man/length.Rd
man/hzMetadata.Rd
man/isEmpty.Rd
man/horizonDepths.Rd
man/duplicate.Rd
man/grepSPC.Rd
man/doublebracket-set.Rd
man/lunique.Rd
man/alignTransect.Rd
man/sierraTransect.Rd
man/profile_compare.Rd
man/pbindlist.Rd
man/equivalentMunsellChips.Rd
man/combine-SoilProfileCollection-method.Rd
man/SoilTextureLevels.Rd
man/plotMultipleSPC.Rd
man/jacobs2000.Rd
man/validSpatialData.Rd
man/shannonEntropy.Rd
man/missingDataGrid.Rd
man/hzDepthTests.Rd
man/depths.Rd
man/spectral.reference.Rd
man/addVolumeFraction.Rd
man/dollarsign.Rd
man/hzOffset.Rd
man/ca630.Rd
man/accumulateDepths.Rd
man/electroStatics_1D.Rd
man/rgb2munsell.Rd
man/horizonColorIndices.Rd
man/barron.torrent.redness.LAB.Rd
man/buntley.westin.index.Rd
man/hzDistinctnessCodeToOffset.Rd
man/checkSPC.Rd
man/slab.Rd
man/aggregateColor.Rd
man/evalGenHZ.Rd
man/simulateColor.Rd
man/summarizeSPC.Rd
man/allocate.Rd
man/unique.Rd
man/HzDepthLogicSubset.Rd
man/spec2Munsell.Rd
man/subApply.Rd
man/colorChart.Rd
man/spc2mpspline-SoilProfileCollection-method.Rd
man/wilson2022.Rd
man/get.ml.hz.Rd
man/siteNames.Rd
man/reorderHorizons.Rd
man/singlebracket.Rd
man/collapseHz.Rd
man/profileGroupLabels.Rd
man/colorQuantiles.Rd
man/profileApply.Rd
man/perturb.Rd
man/brierScore.Rd
man/NCSP.Rd
man/invertLabelColor.Rd
man/texture.Rd
man/aqp_df_class.Rd
man/mutate_profile.Rd
man/glomApply.Rd
man/hzDesgn.Rd
man/SoilProfileCollection-plotting-methods.Rd
man/us.state.soils.Rd
man/mixMunsell.Rd
man/initSpatial.Rd
man/estimatePSCS.Rd
man/sp6.Rd
man/warpHorizons.Rd
man/crit.clay.argillic.Rd
man/parseMunsell.Rd
man/huePosition.Rd
man/checkHzDepthLogic.Rd
man/evalMissingData.Rd
man/osd.Rd
man/colorContrastPlot.Rd
man/colorContrast.Rd
man/spc_in_sync.Rd
man/transform.Rd
man/equivalent_munsell.Rd
man/compareSites.Rd
man/hztexclname.Rd
man/metadata.Rd
man/estimateSoilColor.Rd
man/L1_profiles.Rd
man/confusionIndex.Rd
man/sp3.Rd
man/munsellHuePosition.Rd
man/unroll.Rd
man/hz_lag.Rd
man/getSoilDepthClass.Rd
man/sp1.Rd
man/lookup_taxpartsize.Rd
man/flagOverlappingHz.Rd
man/contrastClass.Rd
man/soilPalette.Rd
man/mollic.thickness.requirement.Rd
man/guessHzAttrName.Rd
man/horizonNames.Rd
man/explainPlotSPC.Rd
man/aggregateSoilDepth.Rd
man/col2Munsell.Rd
man/getClosestMunsellChip.Rd
man/hzdesgnname.Rd
man/correctAWC.Rd
man/restrictions.Rd
man/profileInformationIndex.Rd
man/plotColorMixture.Rd
man/depthOf.Rd
man/previewColors.Rd
man/slicedHSD.Rd
man/getLastHorizonID.Rd
man/sp2.Rd
man/hz_to_taxpartsize.Rd
man/rowley2019.Rd
man/thompson.bell.darkness.Rd
man/hz_segment.Rd
man/hzTopographyCodeToLineType.Rd
man/hzTopographyCodeToOffset.Rd
man/soiltexture.Rd
man/overlapMetrics.Rd
man/panel.depth_function.Rd
man/get.increase.matrix.Rd
man/subset-SoilProfileCollection-method.Rd
man/depth_units.Rd
man/generalize.hz.Rd
man/addBracket.Rd
man/names.Rd
man/fillHzGaps.Rd
man/bootstrapSoilTexture.Rd
man/site.Rd
man/munsell.Rd
man/hurst.redness.Rd
man/min.Rd
man/estimateAWC.Rd
man/glom.Rd
man/genSlabLabels.Rd
man/replaceHorizons.Rd
man/xtableTauW.Rd
man/slice.Rd
man/soilTextureColorPal.Rd
man/hasDarkColors.Rd
man/harmonize-SoilProfileCollection-method.Rd
man/SANN_1D.Rd
man/reduceSPC.Rd
man/rebuildSPC.Rd
man/idname.Rd
man/quickSPC.Rd
man/doublebracket.Rd
man/diagnostic_hz.Rd
man/plotColorQuantiles.Rd
man/coercion-methods.Rd
man/denormalize.Rd
man/sp5.Rd
man/GHL.Rd
man/hz_intersect.Rd
man/groupSPC.Rd
man/aqp-package.Rd
man/reactionclass.Rd
man/compositeSPC.Rd
man/SoilProfileCollection-class.Rd
man/subsetProfiles.Rd
man/huePositionCircle.Rd
man/split-SoilProfileCollection-method.Rd
man/soil_minerals.Rd
man/sim.Rd
man/hzID.Rd
man/genhzTableToAdjMat.Rd
man/munsell2rgb.Rd
man/harden.rubification.Rd
man/getCambicBounds.Rd
man/repairMissingHzDepths.Rd
man/show.Rd
man/traditionalColorNames.Rd
man/subsetHz-SoilProfileCollection-method.Rd
man/fragmentClasses.Rd
man/contrastChart.Rd
man/estimateSoilDepth.Rd
man/depthWeights.Rd
man/SPC.with.overlap.Rd
man/hzidname.Rd
man/textureTriangleSummary.Rd
man/ROSETTA.centroids.Rd
man/addDiagnosticBracket.Rd
man/guessGenHzLevels.Rd
man/argillic.clay.increase.depth.Rd
man/fragmentSieve.Rd
man/getArgillicBounds.Rd
man/nrow.Rd
man/getSurfaceHorizonDepth.Rd
man/dollarsign-set.Rd
man/plot_distance_graph.Rd
man/reaction.Rd
man/munsell.spectra.Rd
man/harden.melanization.Rd
man/random_profile.Rd
man/hz_dissolve.Rd
man/tauW.Rd
man/SoilProfileCollection-crs.Rd
man/max.Rd
man/splitLogicErrors.Rd
man/dice-SoilProfileCollection-method.Rd
man/groupedProfilePlot.Rd
man/munsell2spc-SoilProfileCollection-method.Rd
