| $,coordDataDT-method |
Man page
|
| $,metaData-method |
Man page
|
| $<-,coordDataDT-method |
Man page
|
| $<-,metaData-method |
Man page
|
| %>% |
Man page
|
| .h5_read_bare |
Man page
|
| .onAttach |
Source code
|
| DT_removeNA |
Man page
Source code
|
| FSV_show |
Man page
|
| FUN |
Source code
|
| OR_test_fnc |
Man page
|
| PAGEEnrich |
Man page
|
| PAGE_DT_method |
Man page
Source code
|
| S3toS4dimObj |
Man page
|
| S3toS4spatGridObj |
Man page
|
| S3toS4spatNetObj |
Man page
|
| S3toS4spatialGridObj |
Man page
|
| [ |
Man page
|
| [,coordDataDT,ANY,ANY,missing-method |
Man page
|
| [,coordDataDT,ANY,missing,missing-method |
Man page
|
| [,coordDataDT,missing,ANY,missing-method |
Man page
|
| [,coordDataDT,missing,missing,missing-method |
Man page
|
| [,dimObj,ANY,ANY,missing-method |
Man page
|
| [,dimObj,missing,missing,missing-method |
Man page
|
| [,enrData,missing,missing,missing-method |
Man page
|
| [,exprData,ANY,ANY,missing-method |
Man page
|
| [,exprData,ANY,missing,missing-method |
Man page
|
| [,exprData,missing,ANY,missing-method |
Man page
|
| [,exprData,missing,missing,missing-method |
Man page
|
| [,giottoPoints,missing,missing,missing-method |
Man page
|
| [,giottoPolygon,missing,missing,missing-method |
Man page
|
| [,metaData,ANY,ANY,missing-method |
Man page
|
| [,metaData,ANY,missing,missing-method |
Man page
|
| [,metaData,missing,ANY,missing-method |
Man page
|
| [,metaData,missing,missing,missing-method |
Man page
|
| [,nnData,missing,missing,missing-method |
Man page
|
| [,spatGridData,missing,missing,missing-method |
Man page
|
| [,spatNetData,missing,missing,missing-method |
Man page
|
| [<-,coordDataDT,missing,missing,ANY-method |
Man page
|
| [<-,coordDataDT,missing,missing-method |
Man page
|
| [<-,dimObj,missing,missing,ANY-method |
Man page
|
| [<-,dimObj,missing,missing-method |
Man page
|
| [<-,enrData,missing,missing,ANY-method |
Man page
|
| [<-,enrData,missing,missing-method |
Man page
|
| [<-,exprData,missing,missing,ANY-method |
Man page
|
| [<-,exprData,missing,missing-method |
Man page
|
| [<-,giottoPoints,missing,missing,ANY-method |
Man page
|
| [<-,giottoPoints,missing,missing-method |
Man page
|
| [<-,giottoPolygon,missing,missing,ANY-method |
Man page
|
| [<-,giottoPolygon,missing,missing-method |
Man page
|
| [<-,metaData,missing,missing,ANY-method |
Man page
|
| [<-,metaData,missing,missing-method |
Man page
|
| [<-,nnData,missing,missing,ANY-method |
Man page
|
| [<-,nnData,missing,missing-method |
Man page
|
| [<-,spatGridData,missing,missing,ANY-method |
Man page
|
| [<-,spatGridData,missing,missing-method |
Man page
|
| [<-,spatNetData,missing,missing,ANY-method |
Man page
|
| [<-,spatNetData,missing,missing-method |
Man page
|
| `$<-` |
Man page
|
| `$` |
Man page
|
| `[<-` |
Man page
|
| `[` |
Man page
|
| abb_mat |
Man page
Source code
|
| abb_spatlocs |
Man page
Source code
|
| activeFeatType |
Man page
|
| activeFeatType,giotto-method |
Man page
|
| activeFeatType-generic |
Man page
|
| activeFeatType<- |
Man page
|
| activeFeatType<-,giotto,character-method |
Man page
|
| activeSpatUnit |
Man page
|
| activeSpatUnit,giotto-method |
Man page
|
| activeSpatUnit-generic |
Man page
|
| activeSpatUnit<- |
Man page
|
| activeSpatUnit<-,giotto,character-method |
Man page
|
| adapt_aspect_ratio |
Man page
Source code
|
| addCellIntMetadata |
Man page
|
| addCellMetadata |
Man page
|
| addCellStatistics |
Man page
|
| addFeatMetadata |
Man page
|
| addFeatStatistics |
Man page
|
| addFeatsPerc |
Man page
|
| addGeneMetadata |
Man page
|
| addGeneStatistics |
Man page
|
| addGenesPerc |
Man page
|
| addGiottoImage |
Man page
|
| addGiottoImageMG |
Man page
|
| addGiottoImageToSpatPlot |
Man page
|
| addGiottoLargeImage |
Man page
|
| addGiottoPoints |
Man page
Source code
|
| addGiottoPoints3D |
Man page
|
| addGiottoPolygons |
Man page
Source code
|
| addHMRF |
Man page
|
| addNetworkLayout |
Man page
|
| addPolygonCells |
Man page
Source code
|
| addSpatialCentroidLocations |
Man page
|
| addSpatialCentroidLocationsLayer |
Man page
|
| addStatistics |
Man page
|
| add_img_array_alpha |
Man page
|
| adjustGiottoMatrix |
Man page
|
| aes_string2 |
Man page
Source code
|
| aggregateStacks |
Man page
|
| aggregateStacksExpression |
Man page
|
| aggregateStacksLocations |
Man page
|
| aggregateStacksPolygonOverlaps |
Man page
|
| aggregateStacksPolygons |
Man page
|
| aggregateStacksPolygonsOLD |
Man page
|
| all_plots_save_function |
Man page
Source code
|
| anndataToGiotto |
Man page
|
| annotateGiotto |
Man page
|
| annotateSpatialGrid |
Man page
|
| annotateSpatialNetwork |
Man page
Source code
|
| annotate_spatlocs_with_spatgrid_2D |
Man page
|
| annotate_spatlocs_with_spatgrid_3D |
Man page
|
| ansi_colors |
Man page
|
| average_feat_feat_expression_in_groups |
Man page
|
| binSpect |
Man page
|
| binSpectMulti |
Man page
|
| binSpectMultiMatrix |
Man page
|
| binSpectSingle |
Man page
|
| binSpectSingleMatrix |
Man page
|
| box_chars |
Man page
Source code
|
| cal_diff_per_interaction |
Man page
|
| cal_expr_residual |
Man page
|
| calc_cov_group_HVF |
Man page
Source code
|
| calc_cov_loess_HVF |
Man page
Source code
|
| calc_spatial_enrichment_DT |
Man page
|
| calc_spatial_enrichment_matrix |
Man page
|
| calc_spatial_enrichment_minimum |
Man page
|
| calc_var_HVF |
Man page
Source code
|
| calculateHVF |
Man page
Source code
|
| calculateHVG |
Man page
|
| calculateMetaTable |
Man page
|
| calculateMetaTableCells |
Man page
|
| calculateOverlapParallel |
Man page
|
| calculateOverlapPolygonImages |
Man page
|
| calculateOverlapRaster |
Man page
|
| calculateOverlapSerial |
Man page
|
| calculate_centroids_polygons |
Man page
Source code
|
| calculate_distance_and_weight |
Man page
Source code
|
| cellMetaObj-class |
Man page
|
| cellProximityBarplot |
Man page
Source code
|
| cellProximityEnrichment |
Man page
|
| cellProximityEnrichmentEachSpot |
Man page
|
| cellProximityEnrichmentSpots |
Man page
Source code
|
| cellProximityHeatmap |
Man page
Source code
|
| cellProximityNetwork |
Man page
Source code
|
| cellProximitySpatPlot |
Man page
Source code
|
| cellProximitySpatPlot2D |
Man page
Source code
|
| cellProximitySpatPlot3D |
Man page
Source code
|
| cellProximityVisPlot |
Man page
Source code
|
| cellProximityVisPlot_2D_ggplot |
Man page
Source code
|
| cellProximityVisPlot_2D_plotly |
Man page
Source code
|
| cellProximityVisPlot_3D_plotly |
Man page
Source code
|
| cell_proximity_spots |
Man page
Source code
|
| cell_proximity_spots_external |
Man page
Source code
|
| cell_proximity_spots_internal |
Man page
Source code
|
| centroids |
Man page
|
| centroids,giottoPolygon-method |
Man page
|
| centroids-generic |
Man page
|
| changeGiottoInstructions |
Man page
Source code
|
| changeImageBg |
Man page
Source code
|
| checkGiottoEnvironment |
Man page
Source code
|
| check_cell_meta_obj |
Man page
|
| check_cell_metadata |
Source code
|
| check_dim_obj |
Man page
|
| check_dimension_reduction |
Source code
|
| check_expr_obj |
Man page
|
| check_feat_meta_obj |
Man page
|
| check_feat_metadata |
Source code
|
| check_feature_info |
Source code
|
| check_github_suite_ver |
Man page
Source code
|
| check_nearest_networks |
Source code
|
| check_py_for_scanpy |
Man page
|
| check_spat_grid_obj |
Man page
|
| check_spat_locs_obj |
Man page
|
| check_spat_net_obj |
Man page
|
| check_spatial_enrichment |
Source code
|
| check_spatial_info |
Source code
|
| check_spatial_location_data |
Man page
Source code
|
| check_spatial_networks |
Source code
|
| circleVertices |
Man page
|
| clusterCells |
Man page
|
| clusterSpatialCorFeats |
Man page
|
| clusterSpatialCorGenes |
Man page
|
| cluster_enrich_analysis |
Man page
|
| colMeans_flex |
Man page
Source code
|
| colSums_flex |
Man page
Source code
|
| colnames |
Man page
|
| colnames,exprObj-method |
Man page
|
| color_tag |
Man page
|
| combCCcom |
Man page
|
| combineCPG |
Man page
|
| combineCellData |
Man page
|
| combineCellProximityGenes |
Man page
|
| combineFeatureData |
Man page
|
| combineFeatureOverlapData |
Man page
|
| combineICF |
Man page
|
| combineICG |
Man page
|
| combineInteractionChangedFeats |
Man page
|
| combineInteractionChangedFeatures_per_interaction |
Man page
|
| combineInteractionChangedGenes |
Man page
|
| combineMetadata |
Man page
|
| combineSpatialCellFeatureInfo |
Man page
|
| combineSpatialCellMetadataInfo |
Man page
|
| combine_matrices |
Man page
|
| combine_polygons |
Man page
|
| combine_spatlocs |
Man page
|
| combine_stack_spatVectors |
Man page
|
| compareCellAbundance |
Man page
Source code
|
| comparePolygonExpression |
Man page
Source code
|
| compatible_spatial_network |
Man page
Source code
|
| convertEnsemblToGeneSymbol |
Man page
Source code
|
| convertGiottoLargeImageToMG |
Man page
|
| convert_mgImage_to_array_DT |
Man page
Source code
|
| convert_to_full_spatial_network |
Man page
Source code
|
| convert_to_reduced_spatial_network |
Man page
Source code
|
| coordDataDT-class |
Man page
|
| copy |
Man page
|
| copy,coordDataDT-method |
Man page
|
| copy-generic |
Man page
|
| cor_flex |
Man page
Source code
|
| createCellMetaObj |
Man page
|
| createCrossSection |
Man page
Source code
|
| createDimObj |
Man page
|
| createExprObj |
Man page
|
| createFeatMetaObj |
Man page
|
| createGiottoCosMxObject |
Man page
Source code
|
| createGiottoCosMxObject_aggregate |
Man page
Source code
|
| createGiottoCosMxObject_all |
Man page
Source code
|
| createGiottoCosMxObject_subcellular |
Man page
Source code
|
| createGiottoImage |
Man page
Source code
|
| createGiottoImageOLD |
Man page
|
| createGiottoInstructions |
Man page
Source code
|
| createGiottoLargeImage |
Man page
Source code
|
| createGiottoLargeImageList |
Man page
Source code
|
| createGiottoMerscopeObject |
Man page
Source code
|
| createGiottoMerscopeObject_aggregate |
Man page
Source code
|
| createGiottoMerscopeObject_subcellular |
Man page
Source code
|
| createGiottoObject |
Man page
Source code
|
| createGiottoObjectSubcellular |
Man page
|
| createGiottoPoints |
Man page
|
| createGiottoPolygonsFromDfr |
Man page
|
| createGiottoPolygonsFromMask |
Man page
|
| createGiottoVisiumObject |
Man page
Source code
|
| createGiottoXeniumObject |
Man page
Source code
|
| createGiottoXeniumObject_aggregate |
Man page
Source code
|
| createGiottoXeniumObject_subcellular |
Man page
Source code
|
| createHeatmap_DT |
Man page
Source code
|
| createMetafeats |
Man page
|
| createMetagenes |
Man page
|
| createNearestNetObj |
Man page
|
| createNearestNetwork |
Man page
Source code
|
| createSpatEnrObj |
Man page
|
| createSpatLocsObj |
Man page
|
| createSpatNetObj |
Man page
|
| createSpatialDefaultGrid |
Man page
|
| createSpatialDelaunayNetwork |
Man page
Source code
|
| createSpatialEnrich |
Man page
|
| createSpatialFeaturesKNNnetwork |
Man page
|
| createSpatialFeaturesKNNnetwork_dbscan |
Man page
|
| createSpatialGrid |
Man page
|
| createSpatialKNNnetwork |
Man page
|
| createSpatialNetwork |
Man page
Source code
|
| createSpatialWeightMatrix |
Man page
Source code
|
| create_2d_mesh_grid_line_obj |
Man page
Source code
|
| create_KNNnetwork_dbscan |
Man page
Source code
|
| create_average_DT |
Man page
Source code
|
| create_average_detection_DT |
Man page
Source code
|
| create_cell_type_random_cell_IDs |
Man page
|
| create_cluster_matrix |
Man page
|
| create_crossSection_object |
Man page
Source code
|
| create_delaunayNetwork2D |
Man page
|
| create_delaunayNetwork3D |
Man page
|
| create_delaunayNetwork_RTriangle |
Man page
Source code
|
| create_delaunayNetwork_deldir |
Man page
Source code
|
| create_delaunayNetwork_geometry |
Man page
Source code
|
| create_delaunayNetwork_geometry_3D |
Man page
Source code
|
| create_feats_to_use_matrix |
Man page
Source code
|
| create_featureNetwork_object |
Man page
|
| create_genes_to_use_matrix |
Man page
|
| create_giotto_instructions |
Source code
|
| create_giotto_points_object |
Man page
|
| create_giotto_polygon_object |
Man page
|
| create_jackstrawplot |
Man page
Source code
|
| create_mesh_grid_lines |
Man page
Source code
|
| create_screeplot |
Man page
Source code
|
| create_segm_polygons |
Man page
Source code
|
| create_spat_enr_obj |
Man page
|
| create_spat_grid_obj |
Man page
|
| create_spat_locs_obj |
Man page
|
| create_spatialGrid_default_2D |
Man page
|
| create_spatialGrid_default_3D |
Man page
|
| create_spatvector_object_from_dfr |
Man page
|
| create_terra_spatRaster |
Man page
|
| cropGiottoLargeImage |
Man page
|
| crossSectionGenePlot |
Man page
Source code
|
| crossSectionGenePlot3D |
Man page
Source code
|
| crossSectionPlot |
Man page
Source code
|
| crossSectionPlot3D |
Man page
Source code
|
| data.table |
Man page
|
| data.table-class |
Man page
|
| data_access_params |
Man page
|
| decide_cluster_order |
Man page
Source code
|
| definition |
Source code
|
| degrees |
Man page
|
| density_giottoLargeImage |
Man page
|
| depth |
Man page
Source code
|
| detectSpatialCorFeats |
Man page
|
| detectSpatialCorFeatsMatrix |
Man page
|
| detectSpatialCorGenes |
Man page
|
| detectSpatialPatterns |
Man page
|
| determine_cores |
Man page
Source code
|
| dim,enrData-method |
Man page
|
| dim,exprData-method |
Man page
|
| dim,metaData-method |
Man page
|
| dimCellPlot |
Man page
|
| dimCellPlot2D |
Man page
|
| dimFeatPlot2D |
Man page
|
| dimGenePlot |
Man page
|
| dimGenePlot2D |
Man page
|
| dimGenePlot3D |
Man page
|
| dimObj-class |
Man page
|
| dimPlot |
Man page
|
| dimPlot2D |
Man page
|
| dimPlot2D_single |
Man page
|
| dimPlot3D |
Man page
|
| dimPlot_2D_plotly |
Man page
|
| dimPlot_3D_plotly |
Man page
|
| dims-generic |
Man page
|
| distGiottoImage |
Man page
|
| dist_giottoLargeImage |
Man page
|
| doCellSegmentation |
Man page
Source code
|
| doHMRF |
Man page
Source code
|
| doHclust |
Man page
|
| doKmeans |
Man page
|
| doLeidenCluster |
Man page
Source code
|
| doLeidenSubCluster |
Man page
|
| doLouvainCluster |
Man page
Source code
|
| doLouvainCluster_community |
Man page
Source code
|
| doLouvainCluster_multinet |
Man page
Source code
|
| doLouvainSubCluster |
Man page
|
| doLouvainSubCluster_community |
Man page
|
| doLouvainSubCluster_multinet |
Man page
|
| doRandomWalkCluster |
Man page
Source code
|
| doSNNCluster |
Man page
Source code
|
| doScrubletDetect |
Man page
Source code
|
| do_cell_proximity_test |
Man page
|
| do_cell_proximity_test_spot |
Man page
|
| do_gpoly |
Man page
Source code
|
| do_limmatest |
Man page
|
| do_multi_permuttest_random |
Man page
|
| do_multi_permuttest_random_spot |
Man page
|
| do_page_permutation |
Man page
Source code
|
| do_permuttest |
Man page
|
| do_permuttest_original |
Man page
|
| do_permuttest_original_spot |
Man page
|
| do_permuttest_random |
Man page
|
| do_permuttest_random_spot |
Man page
|
| do_permuttest_spot |
Man page
|
| do_rank_permutation |
Man page
|
| do_spatial_grid_averaging |
Man page
|
| do_spatial_knn_smoothing |
Man page
|
| do_ttest |
Man page
|
| do_wilctest |
Man page
|
| dt_to_matrix |
Man page
Source code
|
| dt_to_spatVector_points |
Man page
|
| dt_to_spatVector_polygon |
Man page
|
| emacs_version |
Man page
|
| enrData-class |
Man page
|
| enrich_analysis |
Man page
|
| enrich_deconvolution |
Man page
|
| estimateCellCellDistance |
Man page
Source code
|
| estimateImageBg |
Man page
Source code
|
| evaluate_cell_metadata |
Source code
|
| evaluate_dimension_reduction |
Source code
|
| evaluate_expr_matrix |
Source code
|
| evaluate_feat_info |
Source code
|
| evaluate_feat_metadata |
Source code
|
| evaluate_gpoly_dfr |
Source code
|
| evaluate_gpoly_spatvector |
Source code
|
| evaluate_nearest_networks |
Source code
|
| evaluate_provided_spatial_locations |
Man page
|
| evaluate_spatial_enrichment |
Source code
|
| evaluate_spatial_info |
Source code
|
| evaluate_spatial_locations |
Source code
|
| evaluate_spatial_locations_OLD |
Source code
|
| evaluate_spatial_network |
Source code
|
| expand_feature_info |
Man page
Source code
|
| exportGiottoViewer |
Man page
Source code
|
| exprCellCellcom |
Man page
|
| exprData-class |
Man page
|
| exprObj-class |
Man page
|
| extend_vector |
Man page
Source code
|
| extended_gini_fun |
Man page
Source code
|
| extract-methods |
Man page
|
| extract_points_list |
Source code
|
| extract_polygon_list |
Source code
|
| fDataDT |
Man page
Source code
|
| featData-class |
Man page
|
| featExpDWLS |
Man page
|
| featIDs |
Man page
|
| featIDs,exprObj,missing-method |
Man page
|
| featIDs,giotto,character-method |
Man page
|
| featIDs,giotto,missing-method |
Man page
|
| featIDs,giottoPoints,missing-method |
Man page
|
| featIDs,spatEnrObj,missing-method |
Man page
|
| featMetaObj-class |
Man page
|
| featType |
Man page
|
| featType,featData-method |
Man page
|
| featType-generic |
Man page
|
| featType<- |
Man page
|
| featType<-,featData-method |
Man page
|
| featureNetwork |
Man page
|
| featureNetwork-class |
Man page
|
| fiji |
Man page
Source code
|
| filterCPG |
Man page
|
| filterCellProximityGenes |
Man page
|
| filterCombinations |
Man page
Source code
|
| filterDistributions |
Man page
Source code
|
| filterGiotto |
Man page
|
| filterICF |
Man page
|
| filterICFSpot |
Man page
|
| filterICG |
Man page
|
| filterInteractionChangedFeats |
Man page
|
| filterInteractionChangedGenes |
Man page
|
| filter_network |
Man page
Source code
|
| findCPG |
Man page
|
| findCellProximityFeats_per_interaction |
Man page
|
| findCellProximityGenes |
Man page
|
| findGiniMarkers |
Man page
Source code
|
| findGiniMarkers_one_vs_all |
Man page
|
| findICF |
Man page
|
| findICFSpot |
Man page
|
| findICF_per_interaction_spot |
Man page
|
| findICG |
Man page
|
| findInteractionChangedFeats |
Man page
|
| findInteractionChangedGenes |
Man page
|
| findMarkers |
Man page
|
| findMarkers_one_vs_all |
Man page
|
| findMastMarkers |
Man page
|
| findMastMarkers_one_vs_all |
Man page
|
| findNetworkNeighbors |
Man page
|
| findScranMarkers |
Man page
Source code
|
| findScranMarkers_one_vs_all |
Man page
Source code
|
| find_dampening_constant |
Man page
|
| find_grid_2D |
Man page
Source code
|
| find_grid_3D |
Man page
Source code
|
| find_grid_x |
Man page
Source code
|
| find_grid_y |
Man page
|
| find_grid_z |
Man page
|
| find_terra_writeRaster_dataType |
Man page
|
| find_x_y_ranges |
Man page
Source code
|
| fix_multipart_geoms |
Man page
Source code
|
| flex_lapply |
Man page
Source code
|
| fread_colmatch |
Man page
|
| fun |
Source code
|
| gefToGiotto |
Man page
Source code
|
| general_save_function |
Man page
Source code
|
| get10Xmatrix |
Man page
Source code
|
| get10XmatrixOLD |
Man page
Source code
|
| get10Xmatrix_h5 |
Man page
Source code
|
| getBalancedSpatCoexpressionFeats |
Man page
|
| getCellMetadata |
Man page
Source code
|
| getCellsFromPolygon |
Man page
Source code
|
| getClusterSimilarity |
Man page
|
| getDendrogramSplits |
Man page
|
| getDimReduction |
Man page
Source code
|
| getDistinctColors |
Man page
Source code
|
| getExpression |
Man page
Source code
|
| getFeatureInfo |
Man page
|
| getFeatureMetadata |
Man page
Source code
|
| getGEFtxCoords |
Man page
|
| getGiottoImage |
Man page
|
| getMultiomics |
Man page
|
| getNearestNetwork |
Man page
Source code
|
| getPolygonInfo |
Man page
Source code
|
| getRainbowColors |
Man page
Source code
|
| getSpatialEnrichment |
Man page
|
| getSpatialGrid |
Man page
Source code
|
| getSpatialLocations |
Man page
Source code
|
| getSpatialNetwork |
Man page
Source code
|
| get_NearestNetwork |
Man page
Source code
|
| get_adj_rescale_img |
Man page
|
| get_cell_id |
Man page
Source code
|
| get_cell_metadata |
Man page
Source code
|
| get_cross_section_coordinates |
Man page
Source code
|
| get_dimReduction |
Man page
Source code
|
| get_dim_reduction_list |
Source code
|
| get_distance |
Man page
Source code
|
| get_expression_values |
Source code
|
| get_expression_values_list |
Source code
|
| get_feat_id |
Man page
Source code
|
| get_feature_info |
Man page
|
| get_feature_metadata |
Man page
Source code
|
| get_giottoImage |
Man page
|
| get_giottoImage_MG |
Man page
|
| get_giottoLargeImage |
Man page
|
| get_img_corners |
Man page
Source code
|
| get_img_minmax |
Man page
|
| get_multiomics |
Man page
|
| get_nearest_network_list |
Source code
|
| get_os |
Man page
Source code
|
| get_polygon_info |
Man page
Source code
|
| get_polygon_info_list |
Source code
|
| get_sectionThickness |
Man page
Source code
|
| get_spatialGrid |
Man page
Source code
|
| get_spatialNetwork |
Man page
Source code
|
| get_spatial_enrichment |
Man page
|
| get_spatial_locations |
Man page
Source code
|
| get_spatial_locations_list |
Source code
|
| get_spatial_network_list |
Source code
|
| ggplot_save_function |
Man page
Source code
|
| giotto |
Man page
|
| giotto-class |
Man page
|
| giottoImage |
Man page
|
| giottoImage-class |
Man page
|
| giottoLargeImage |
Man page
|
| giottoLargeImage-class |
Man page
|
| giottoPoints |
Man page
|
| giottoPoints-class |
Man page
|
| giottoPolygon |
Man page
|
| giottoPolygon-class |
Man page
|
| giottoToAnnData |
Man page
|
| giottoToSeurat |
Man page
|
| giottoToSpatialExperiment |
Man page
|
| giotto_alloc_dt_slots |
Man page
Source code
|
| giotto_lapply |
Man page
|
| giotto_point |
Man page
Source code
|
| giotto_slot_depths |
Source code
|
| gpoly_from_dfr_smoothed_wrapped |
Man page
|
| h5read_vizgen |
Man page
|
| heatmSpatialCorFeats |
Man page
|
| heatmSpatialCorGenes |
Man page
|
| hexVertices |
Man page
|
| hyperGeometricEnrich |
Man page
|
| identify_background_range_polygons |
Man page
Source code
|
| init_cell_and_feat_IDs |
Source code
|
| init_cell_metadata |
Man page
Source code
|
| init_feat_metadata |
Man page
Source code
|
| insertCrossSectionGenePlot3D |
Man page
Source code
|
| insertCrossSectionSpatPlot3D |
Man page
Source code
|
| installGiottoEnvironment |
Man page
Source code
|
| install_giotto_environment |
Man page
Source code
|
| install_giotto_environment_specific |
Man page
Source code
|
| instructions |
Man page
|
| instructions,giotto,character-method |
Man page
|
| instructions,giotto,missing-method |
Man page
|
| instructions-generic |
Man page
|
| instructions<- |
Man page
|
| instructions<-,giotto,character,logical-method |
Man page
|
| instructions<-,giotto,character,missing-method |
Man page
|
| instructions<-,giotto,missing,logical-method |
Man page
|
| instructions<-,giotto,missing,missing-method |
Man page
|
| is_emacs_with_color |
Man page
|
| is_empty_char |
Source code
|
| is_latex_output |
Man page
Source code
|
| is_utf8_output |
Man page
Source code
|
| jackstrawPlot |
Man page
Source code
|
| joinGiottoObjects |
Man page
|
| kmeans_arma_binarize |
Man page
Source code
|
| kmeans_arma_subset_binarize |
Man page
Source code
|
| kmeans_binarize |
Man page
Source code
|
| kmeans_binarize_wrapper |
Man page
Source code
|
| lapply_flex |
Man page
Source code
|
| libNorm_giotto |
Man page
Source code
|
| list_cell_id_names |
Man page
|
| list_cell_metadata |
Man page
|
| list_dim_reductions |
Man page
|
| list_dim_reductions_names |
Man page
|
| list_element_exists |
Source code
|
| list_expression |
Man page
|
| list_expression_names |
Man page
|
| list_feat_id_names |
Man page
|
| list_feat_metadata |
Man page
|
| list_feature_info |
Man page
|
| list_feature_info_names |
Man page
|
| list_giotto_data |
Man page
|
| list_images |
Man page
|
| list_images_names |
Man page
|
| list_nearest_networks |
Man page
|
| list_nearest_networks_names |
Man page
|
| list_spatial_enrichments |
Man page
|
| list_spatial_enrichments_names |
Man page
|
| list_spatial_grids |
Man page
|
| list_spatial_grids_names |
Man page
|
| list_spatial_info |
Man page
|
| list_spatial_info_names |
Man page
|
| list_spatial_locations |
Man page
|
| list_spatial_locations_names |
Man page
|
| list_spatial_networks |
Man page
|
| list_spatial_networks_names |
Man page
|
| loadGiotto |
Man page
Source code
|
| loadHMRF |
Man page
|
| load_cosmx_folder_aggregate |
Man page
|
| load_cosmx_folder_subcellular |
Man page
|
| load_merscope_folder |
Man page
|
| load_merscope_folder_aggregate |
Man page
|
| load_merscope_folder_subcellular |
Man page
|
| load_xenium_folder |
Man page
|
| load_xenium_folder_csv |
Man page
|
| load_xenium_folder_parquet |
Man page
|
| logNorm_giotto |
Man page
Source code
|
| makeSignMatrixDWLS |
Man page
Source code
|
| makeSignMatrixDWLSfromMatrix |
Man page
Source code
|
| makeSignMatrixPAGE |
Man page
Source code
|
| makeSignMatrixRank |
Man page
Source code
|
| make_simulated_network |
Man page
Source code
|
| mean_expr_det_test |
Man page
Source code
|
| mean_flex |
Man page
Source code
|
| mergeClusters |
Man page
|
| merge_spatial_locs_feat_info |
Man page
|
| metaData-class |
Man page
|
| miscData-class |
Man page
|
| my_arowMeans |
Man page
Source code
Source code
|
| my_growMeans |
Man page
Source code
Source code
|
| my_rowMeans |
Man page
Source code
Source code
|
| mygini_fun |
Man page
Source code
|
| ncol,exprData-method |
Man page
|
| ncol,metaData-method |
Man page
|
| nnDT_to_kNN |
Man page
|
| nnNetObj-class |
Man page
|
| node_clusters |
Man page
|
| normalizeGiotto |
Man page
|
| nrow,enrData-method |
Man page
|
| nrow,exprData-method |
Man page
|
| nrow,giottoPoints-method |
Man page
|
| nrow,giottoPolygon-method |
Man page
|
| nrow,metaData-method |
Man page
|
| nrow,spatLocsObj-method |
Man page
|
| nrow,spatialNetworkObj-method |
Man page
|
| nullOrChar-class |
Man page
|
| nullOrDatatable-class |
Man page
|
| nullOrList-class |
Man page
|
| objHistory |
Man page
|
| objName |
Man page
|
| objName,nameData-method |
Man page
|
| objName-generic |
Man page
|
| objName<- |
Man page
|
| objName<-,nameData-method |
Man page
|
| optimize_deconvolute_dwls |
Man page
|
| optimize_solveDampenedWLS |
Man page
|
| overlapImagesToMatrix |
Man page
|
| overlapToMatrix |
Man page
|
| overlapToMatrixMultiPoly |
Man page
|
| overlap_points_per_polygon |
Man page
|
| overlap_points_per_polygon_wrapped |
Man page
|
| overlap_points_single_polygon |
Man page
|
| overlaps |
Man page
|
| overlaps,giottoPolygon-method |
Man page
|
| overlaps-generic |
Man page
|
| pDataDT |
Man page
Source code
|
| package_check |
Man page
Source code
|
| pca_giotto |
Man page
Source code
|
| plot |
Man page
|
| plot,giottoImage,missing-method |
Man page
|
| plot,giottoLargeImage,missing-method |
Man page
|
| plot,giottoPoints,missing-method |
Man page
|
| plot,giottoPolygon,missing-method |
Man page
|
| plot,spatLocsObj,missing-method |
Man page
|
| plot,spatialNetworkObj,missing-method |
Man page
|
| plot-generic |
Man page
|
| plotCCcomDotplot |
Man page
Source code
|
| plotCCcomHeatmap |
Man page
Source code
|
| plotCPF |
Man page
Source code
|
| plotCPG |
Man page
Source code
|
| plotCellProximityFeatSpot |
Man page
|
| plotCellProximityFeats |
Man page
Source code
|
| plotCellProximityGenes |
Man page
Source code
|
| plotCombineCCcom |
Man page
Source code
|
| plotCombineCPG |
Man page
Source code
|
| plotCombineCellCellCommunication |
Man page
Source code
|
| plotCombineCellProximityGenes |
Man page
Source code
|
| plotCombineICF |
Man page
Source code
|
| plotCombineICG |
Man page
Source code
|
| plotCombineInteractionChangedFeats |
Man page
Source code
|
| plotCombineInteractionChangedGenes |
Man page
Source code
|
| plotGiottoImage |
Man page
|
| plotHeatmap |
Man page
Source code
|
| plotICF |
Man page
Source code
|
| plotICFSpot |
Man page
|
| plotICG |
Man page
Source code
|
| plotInteractionChangedFeats |
Man page
Source code
|
| plotInteractionChangedGenes |
Man page
Source code
|
| plotInteractivePolygons |
Man page
Source code
|
| plotMetaDataCellsHeatmap |
Man page
Source code
|
| plotMetaDataHeatmap |
Man page
Source code
|
| plotPCA |
Man page
|
| plotPCA_2D |
Man page
|
| plotPCA_3D |
Man page
|
| plotPolygons |
Man page
Source code
|
| plotRankSpatvsExpr |
Man page
Source code
|
| plotRecovery |
Man page
Source code
|
| plotRecovery_sub |
Man page
Source code
|
| plotStatDelaunayNetwork |
Man page
Source code
|
| plotTSNE |
Man page
|
| plotTSNE_2D |
Man page
|
| plotTSNE_3D |
Man page
|
| plotUMAP |
Man page
|
| plotUMAP_2D |
Man page
|
| plotUMAP_3D |
Man page
|
| plot_auto_largeImage_resample |
Man page
Source code
|
| plot_cell_polygon_layer |
Man page
Source code
|
| plot_feature_hexbin_layer |
Man page
|
| plot_feature_points_layer |
Man page
|
| plot_feature_raster_density_layer |
Man page
|
| plot_giottoImage_MG |
Man page
|
| plot_giottoLargeImage |
Man page
|
| plot_network_layer_ggplot |
Source code
|
| plot_params |
Man page
|
| plot_point_layer_ggplot |
Source code
|
| plotly_axis_scale_2D |
Man page
Source code
|
| plotly_axis_scale_3D |
Man page
Source code
|
| plotly_grid |
Man page
Source code
|
| plotly_network |
Man page
Source code
|
| polyStamp |
Man page
|
| polygon_to_raster |
Man page
|
| polygon_to_raster_OLD |
Man page
Source code
|
| print_leaf |
Man page
Source code
|
| processGiotto |
Man page
|
| projection_fun |
Man page
Source code
|
| prov |
Man page
|
| prov,provData-method |
Man page
|
| prov-generic |
Man page
|
| prov<- |
Man page
|
| prov<-,provData-method |
Man page
|
| provData-class |
Man page
|
| prov_match |
Man page
|
| radians |
Man page
|
| rankEnrich |
Man page
|
| rankSpatialCorGroups |
Man page
|
| rank_binarize |
Man page
Source code
|
| rank_binarize_wrapper |
Man page
Source code
|
| rbind-generic |
Man page
|
| rbind2,giottoPolygon,giottoPolygon-method |
Man page
|
| rbind2_giotto_polygon_hetero |
Man page
|
| rbind2_giotto_polygon_homo |
Man page
|
| readCellMetadata |
Man page
Source code
|
| readDimReducData |
Man page
Source code
|
| readExprData |
Man page
Source code
|
| readExprMatrix |
Man page
Source code
|
| readFeatData |
Man page
Source code
|
| readFeatMetadata |
Man page
Source code
|
| readGiottoInstructions |
Man page
Source code
|
| readNearestNetData |
Man page
Source code
|
| readPolygonData |
Man page
Source code
|
| readPolygonFilesVizgen |
Man page
|
| readPolygonFilesVizgenHDF5 |
Man page
|
| readPolygonFilesVizgenHDF5_old |
Man page
Source code
|
| readSpatEnrichData |
Man page
Source code
|
| readSpatLocsData |
Man page
Source code
|
| readSpatNetData |
Man page
Source code
|
| read_cell_metadata |
Man page
Source code
|
| read_cosmx_folder |
Man page
|
| read_crossSection |
Man page
Source code
|
| read_data_folder |
Man page
Source code
|
| read_dimension_reduction |
Source code
|
| read_expression_data |
Source code
|
| read_feature_metadata |
Man page
Source code
|
| read_merscope_folder |
Man page
|
| read_nearest_networks |
Source code
|
| read_s4_nesting |
Source code
|
| read_spatial_enrichment |
Source code
|
| read_spatial_location_data |
Source code
|
| read_spatial_networks |
Source code
|
| read_xenium_folder |
Man page
|
| reconnectGiottoImage |
Man page
|
| reconnect_giottoImage_MG |
Man page
|
| reconnect_giottoLargeImage |
Man page
|
| reconnect_image_object |
Man page
|
| rectVertices |
Man page
|
| reg_img_minmax_finder |
Man page
Source code
|
| registerGiottoObjectList |
Man page
Source code
|
| registerGiottoObjectListFiji |
Man page
Source code
|
| registerGiottoObjectListRvision |
Man page
Source code
|
| registerImagesFIJI |
Man page
Source code
|
| removeCellAnnotation |
Man page
|
| removeFeatAnnotation |
Man page
|
| removeGiottoEnvironment |
Man page
Source code
|
| replaceGiottoInstructions |
Man page
Source code
|
| rescalePolygons |
Man page
|
| rescale_polygons |
Man page
|
| reshape_to_data_point |
Man page
Source code
|
| reshape_to_mesh_grid_obj |
Man page
Source code
|
| return_giotto_environment_path |
Man page
Source code
|
| return_giotto_environment_path_executable |
Man page
Source code
|
| rigid_transform_spatial_locations |
Man page
Source code
|
| rna_osmfish_normalization |
Man page
|
| rna_pears_resid_normalization |
Man page
|
| rna_standard_normalization |
Man page
|
| rotate_spatial_locations |
Man page
Source code
|
| row-plus-colnames-generic |
Man page
|
| rowMeans_flex |
Man page
Source code
|
| rowSums_flex |
Man page
Source code
|
| rownames |
Man page
|
| rownames,exprObj-method |
Man page
|
| runDWLSDeconv |
Man page
|
| runGiottoHarmony |
Man page
Source code
|
| runHyperGeometricEnrich |
Man page
|
| runIntegratedUMAP |
Man page
Source code
|
| runPAGEEnrich |
Man page
|
| runPAGEEnrich_OLD |
Man page
Source code
|
| runPCA |
Man page
Source code
|
| runPCA_BiocSingular |
Man page
Source code
|
| runPCA_factominer |
Man page
Source code
|
| runPCA_prcomp_irlba |
Man page
Source code
|
| runPatternSimulation |
Man page
|
| runRankEnrich |
Man page
|
| runSpatialDeconv |
Man page
|
| runSpatialEnrich |
Man page
|
| runUMAP |
Man page
Source code
|
| runWNN |
Man page
Source code
|
| run_spat_autocor_global |
Man page
|
| run_spat_autocor_local |
Man page
|
| run_spatial_sim_tests_multi |
Man page
|
| run_spatial_sim_tests_one_rep |
Man page
|
| runtSNE |
Man page
Source code
|
| saveGiotto |
Man page
Source code
|
| scale_spatial_locations |
Man page
Source code
|
| screePlot |
Man page
Source code
|
| selectPatternGenes |
Man page
|
| select_gimage |
Man page
Source code
|
| setCellMetadata |
Man page
Source code
|
| setDimReduction |
Man page
Source code
|
| setExpression |
Man page
Source code
|
| setFeatureInfo |
Man page
|
| setFeatureMetadata |
Man page
Source code
|
| setGiottoImage |
Man page
|
| setMultiomics |
Man page
|
| setNearestNetwork |
Man page
Source code
|
| setPolygonInfo |
Man page
Source code
|
| setSpatialEnrichment |
Man page
|
| setSpatialGrid |
Man page
Source code
|
| setSpatialLocations |
Man page
Source code
|
| setSpatialNetwork |
Man page
Source code
|
| set_NearestNetwork |
Man page
Source code
|
| set_cell_id |
Man page
Source code
|
| set_cell_metadata |
Man page
Source code
|
| set_default_cow_n_col |
Man page
Source code
|
| set_default_feat_type |
Man page
Source code
|
| set_default_spat_unit |
Man page
Source code
|
| set_dimReduction |
Man page
Source code
|
| set_expression_values |
Man page
Source code
|
| set_feat_id |
Man page
Source code
|
| set_feature_info |
Man page
|
| set_feature_metadata |
Source code
|
| set_giottoImage |
Man page
|
| set_giottoImage_MG |
Man page
|
| set_giottoLargeImage |
Man page
|
| set_giotto_python_path |
Man page
Source code
|
| set_multiomics |
Man page
|
| set_polygon_info |
Man page
|
| set_row_order_dt |
Source code
|
| set_spatialGrid |
Man page
Source code
|
| set_spatialNetwork |
Man page
Source code
|
| set_spatial_enrichment |
Man page
|
| set_spatial_locations |
Man page
Source code
|
| seuratToGiotto |
Man page
|
| seuratToGiotto_OLD |
Man page
|
| shift_spatial_locations |
Man page
Source code
|
| shift_spatial_network |
Man page
Source code
|
| show,dimObj-method |
Man page
|
| show,exprObj-method |
Man page
|
| show,giotto-method |
Man page
|
| show,giottoImage-method |
Man page
|
| show,giottoLargeImage-method |
Man page
|
| show,nnNetObj-method |
Man page
|
| show,spatEnrObj-method |
Man page
|
| show,spatLocsObj-method |
Man page
|
| show,spatialGridObj-method |
Man page
|
| show,spatialNetworkObj-method |
Man page
|
| showClusterDendrogram |
Man page
Source code
|
| showClusterHeatmap |
Man page
Source code
|
| showGiottoCellMetadata |
Man page
|
| showGiottoDimRed |
Man page
|
| showGiottoExpression |
Man page
|
| showGiottoFeatInfo |
Man page
|
| showGiottoFeatMetadata |
Man page
|
| showGiottoImageNames |
Man page
|
| showGiottoInstructions |
Man page
Source code
|
| showGiottoNearestNetworks |
Man page
|
| showGiottoSpatEnrichments |
Man page
|
| showGiottoSpatGrids |
Man page
|
| showGiottoSpatLocs |
Man page
|
| showGiottoSpatNetworks |
Man page
|
| showGiottoSpatialInfo |
Man page
|
| showGrids |
Man page
|
| showNetworks |
Man page
|
| showPattern |
Man page
|
| showPattern2D |
Man page
|
| showPattern3D |
Man page
|
| showPatternGenes |
Man page
|
| showProcessingSteps |
Man page
|
| showSaveParameters |
Man page
Source code
|
| showSpatialCorFeats |
Man page
|
| showSpatialCorGenes |
Man page
|
| signPCA |
Man page
Source code
|
| silhouetteRank |
Man page
|
| silhouetteRankTest |
Man page
|
| simulateOneGenePatternGiottoObject |
Man page
|
| slot |
Man page
|
| slotNames |
Man page
|
| smoothGiottoPolygons |
Man page
|
| solve_OLS_internal |
Man page
|
| solve_dampened_WLSj |
Man page
|
| sort_combine_two_DT_columns |
Man page
Source code
|
| spark |
Man page
|
| spatCellCellcom |
Man page
|
| spatCellCellcomSpots |
Man page
|
| spatCellPlot |
Man page
|
| spatCellPlot2D |
Man page
|
| spatData-class |
Man page
|
| spatDeconvPlot |
Man page
|
| spatDimCellPlot |
Man page
|
| spatDimCellPlot2D |
Man page
|
| spatDimFeatPlot2D |
Man page
|
| spatDimGenePlot |
Man page
|
| spatDimGenePlot2D |
Man page
|
| spatDimGenePlot3D |
Man page
|
| spatDimPlot |
Man page
|
| spatDimPlot2D |
Man page
|
| spatDimPlot3D |
Man page
|
| spatEnrObj-class |
Man page
|
| spatFeatData-class |
Man page
|
| spatFeatPlot2D |
Man page
|
| spatFeatPlot2D_single |
Man page
|
| spatGenePlot |
Man page
|
| spatGenePlot2D |
Man page
|
| spatGenePlot3D |
Man page
|
| spatIDs |
Man page
|
| spatIDs,cellMetaObj,missing-method |
Man page
|
| spatIDs,dimObj,missing-method |
Man page
|
| spatIDs,exprObj,missing-method |
Man page
|
| spatIDs,giotto,character-method |
Man page
|
| spatIDs,giotto,missing-method |
Man page
|
| spatIDs,giottoPolygon,missing-method |
Man page
|
| spatIDs,nnNetObj,missing-method |
Man page
|
| spatIDs,spatEnrObj,missing-method |
Man page
|
| spatIDs,spatLocsObj,missing-method |
Man page
|
| spatIDs,spatialNetworkObj,missing-method |
Man page
|
| spatIDs-generic |
Man page
|
| spatInSituPlotDensity |
Man page
|
| spatInSituPlotDensity_single |
Man page
|
| spatInSituPlotHex |
Man page
|
| spatInSituPlotHex_single |
Man page
|
| spatInSituPlotPoints |
Man page
|
| spatLocsObj-class |
Man page
|
| spatNetwDistributions |
Man page
Source code
|
| spatNetwDistributionsDistance |
Man page
Source code
|
| spatNetwDistributionsKneighbors |
Man page
Source code
|
| spatPlot |
Man page
|
| spatPlot2D |
Man page
|
| spatPlot2D_single |
Man page
|
| spatPlot3D |
Man page
|
| spatPlot_2D_plotly |
Man page
|
| spatPlot_3D_plotly |
Man page
|
| spatShift |
Man page
|
| spatShift,spatLocsObj-method |
Man page
|
| spatShift,spatialNetworkObj-method |
Man page
|
| spatUnit |
Man page
|
| spatUnit,spatData-method |
Man page
|
| spatUnit-generic |
Man page
|
| spatUnit<- |
Man page
|
| spatUnit<-,spatData-method |
Man page
|
| spatVector_to_dt |
Man page
|
| spatVector_to_dt2 |
Man page
|
| spat_OR_func |
Man page
|
| spat_OR_func_DT |
Man page
|
| spat_fish_func |
Man page
Source code
|
| spat_fish_func_DT |
Man page
Source code
|
| spatialAEH |
Man page
|
| spatialAutoCor |
Man page
|
| spatialAutoCorGlobal |
Man page
|
| spatialAutoCorLocal |
Man page
|
| spatialDE |
Man page
|
| spatialExperimentToGiotto |
Man page
|
| spatialGridObj-class |
Man page
|
| spatialNetworkObj-class |
Man page
|
| specificCellCellcommunicationScores |
Man page
|
| specific_CCCScores_spots |
Man page
|
| spin,giottoPoints-method |
Man page
|
| spin,giottoPolygon-method |
Man page
|
| spin,spatLocsObj-method |
Man page
|
| spin-generic |
Man page
|
| spline_poly |
Man page
|
| split_dendrogram_in_two |
Man page
|
| spot_deconvolution |
Man page
|
| standardise_flex |
Man page
|
| stitchFieldCoordinates |
Man page
Source code
|
| stitchGiottoLargeImage |
Man page
|
| stitchTileCoordinates |
Man page
|
| subClusterCells |
Man page
|
| subsetGiotto |
Man page
Source code
|
| subsetGiottoLocs |
Man page
Source code
|
| subsetGiottoLocsMulti |
Man page
Source code
|
| subsetGiottoLocsSubcellular |
Man page
Source code
|
| subset_cell_metadata |
Man page
Source code
|
| subset_dimension_reduction |
Source code
|
| subset_expression_data |
Source code
|
| subset_feature_info_data |
Source code
|
| subset_feature_metadata |
Man page
Source code
|
| subset_giotto_points_object |
Source code
|
| subset_giotto_polygon_object |
Source code
|
| subset_nearest_network |
Source code
|
| subset_spatial_enrichment |
Source code
|
| subset_spatial_info_data |
Source code
|
| subset_spatial_locations |
Source code
|
| subset_spatial_network |
Source code
|
| t |
Man page
|
| t,spatLocsObj-method |
Man page
|
| t,spatialNetworkObj-method |
Man page
|
| t.spatLocsObj |
Man page
|
| t.spatialNetworkObj |
Man page
|
| t_flex |
Man page
Source code
|
| time_format |
Man page
|
| trakem2_rigid_transf_extract |
Man page
Source code
|
| transform_2d_mesh_to_3d_mesh |
Man page
Source code
|
| transpose-generic |
Man page
|
| trendSceek |
Man page
|
| updateGiottoImage |
Man page
|
| updateGiottoImageMG |
Man page
|
| updateGiottoLargeImage |
Man page
|
| updateGiottoObject |
Man page
Source code
|
| updateGiottoPointsObject |
Man page
|
| updateGiottoPolygonObject |
Man page
|
| use_color_text |
Man page
|
| validObject |
Man page
|
| vect,packedGiotto-method |
Man page
|
| vect,packedGiottoPoints-method |
Man page
|
| vect,packedGiottoPolygon-method |
Man page
|
| viewHMRFresults |
Man page
|
| viewHMRFresults2D |
Man page
|
| viewHMRFresults3D |
Man page
|
| violinPlot |
Man page
Source code
|
| wrap,giotto-method |
Man page
|
| wrap,giottoPoints-method |
Man page
|
| wrap,giottoPolygon-method |
Man page
|
| wrap-generic |
Man page
|
| wrap_msg |
Man page
|
| wrap_txt |
Man page
|
| writeGiottoLargeImage |
Man page
|
| writeHMRFresults |
Man page
|
| write_giotto_viewer_annotation |
Man page
Source code
|
| write_giotto_viewer_dim_reduction |
Man page
Source code
|
| write_giotto_viewer_numeric_annotation |
Man page
Source code
|
| xy_translate_spatial_locations |
Source code
|
